RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.78□□□□□ -1.64
SDCBP-210ENST00000522843 KIR2DL5BA0A0G2JN68 375 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 KIR2DL5BA0A0G2JPC4 375 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 E5RGE8 158 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 PPP5D1E7EU14 171 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 SMLR1H3BR10 107 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 CCSO14618 274 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 TNFSF12O43508 249 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 PRH1P02810 166 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 RLN2P04090 185 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 PET100P0DJ07 73 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 NQO2P16083 231 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 RPL35AP18077 110 aaKnown RBP4.78□□□□□ -1.64
SDCBP-210ENST00000522843 CXCL2P19875 107 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 P2RY1P47900 373 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 LGALS7P47929 136 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 IFITM2Q01629 132 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 SMCO1Q147U7 214 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 RPL39P5Q59GN2 51 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 KIR2DL5AQ8N109 375 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 KCNRGQ8N5I3 272 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF383Q8NA42 475 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 DMBX1Q8NFW5 382 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 OR51H1Q8NH63 302 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 KIR2DL5BQ8NHK3 375 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 THAP6Q8TBB0 222 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 USMG5Q96IX5 58 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 HARBI1Q96MB7 349 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 PDCD10Q9BUL8 212 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 SCRT1Q9BWW7 348 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 MAP6D1Q9H9H5 199 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-210ENST00000522843 HSPB7Q9UBY9 170 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 NSG2Q9Y328 171 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
SDCBP-210ENST00000522843 RNF222A6NCQ9 220 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 FAM25EA8MYX2 175 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 INS-IGF2F8WCM5 200 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 K7EPK0 472 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 M0R1X1 148 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 LGALS9O00182 355 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 TAAR5O14804 337 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 OR2C1O95371 312 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 HRASP01112 189 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 IGLV2-23P01705 113 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 IGKV1-16P04430 117 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 CRYGBP07316 175 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 APELAP0DMC3 54 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 INAFM2P0DMQ5 153 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 MT3P25713 68 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 S100A11P31949 105 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 NKX2-1P43699 371 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 PAX9P55771 341 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 ATP5IP56385 69 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 EXOSC2Q13868 293 aaKnown RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 BTNL8Q6UX41 500 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 TMUB2Q71RG4 321 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 PDPNQ86YL7 162 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 PUSL1Q8N0Z8 303 aaKnown RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 OR4S2Q8NH73 311 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 OR1S1Q8NH92 325 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 TCTEX1D2Q8WW35 142 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 SAT2Q96F10 170 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 RRNAD1Q96FB5 475 aaKnown RBP4.77□□□□□ -1.65
SDCBP-210ENST00000522843 SMIM8Q96KF7 97 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 RARRES2Q99969 163 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 GSKIPQ9P0R6 139 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 HSPB11Q9Y547 144 aa4.77□□□□□ -1.65
SDCBP-210ENST00000522843 TRBV9A0A0B4J1U6 114 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 A0A0G2JRQ6 117 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 C11orf94C9JXX5 98 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 FCGR3BO75015 233 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 MED6O75586 246 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 RBMY1A1P0DJD3 496 aaKnown RBP4.76□□□□□ -1.65
SDCBP-210ENST00000522843 RBMY1CP0DJD4 496 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 RHOGP84095 191 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 OPCMLQ14982 345 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 RTL8BQ17RB0 113 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 PVRIGQ6DKI7 326 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 THOC7Q6I9Y2 204 aaKnown RBP4.76□□□□□ -1.65
SDCBP-210ENST00000522843 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 INO80EQ8NBZ0 244 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-210ENST00000522843 OR1L6Q8NGR2 347 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 OR11H2Q8NH07 326 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 OR4A5Q8NH83 315 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 FKBP11Q9NYL4 201 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 BET1LQ9NYM9 111 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 OR5AC2Q9NZP5 309 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 MBD2Q9UBB5 411 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 ZNF257Q9Y2Q1 563 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 WASHC3Q9Y3C0 194 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 AGRNO00468 2067 aa4.76□□□□□ -1.65
SDCBP-210ENST00000522843 LRP1Q07954 4544 aaKnown RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 SRRM4A7MD48 611 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms