RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 OXA1LQ15070 435 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 IZUMO4Q1ZYL8 232 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 RNASE10Q5GAN6 216 aaKnown RBP4.42□□□□□ -1.7
PABPC1-220ENST00000522658 ZNF705AQ6ZN79 300 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-220ENST00000522658 SPATA12Q7Z6I5 190 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 SNX29P2Q8IUI4 249 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 SLC24A4Q8NFF2 622 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 RNASEH2CQ8TDP1 164 aaKnown RBP4.42□□□□□ -1.7
PABPC1-220ENST00000522658 ZNF486Q96H40 463 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-220ENST00000522658 ABHD1Q96SE0 405 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 MUC4Q99102 2169 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 VCX3AQ9NNX9 186 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 RPRMQ9NS64 109 aa4.42□□□□□ -1.7
PABPC1-220ENST00000522658 C14orf166Q9Y224 244 aaKnown RBP4.42□□□□□ -1.7
PABPC1-220ENST00000522658 C3orf85A0A1B0GTC6 90 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 ZFP92A6NM28 416 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 LYRM9A8MSI8 78 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 EPM2AB3EWF7 344 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 INS-IGF2F8WCM5 200 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 TOMM40O96008 361 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 IGLC1P0CG04 106 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 DEFB130BP0DP73 79 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 DEFB130AP0DP74 79 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 GALR1P47211 349 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 UCP3P55916 312 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 LYZP61626 148 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 B2MP61769 119 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 SUPT4H1P63272 117 aaKnown RBP4.41□□□□□ -1.7
PABPC1-220ENST00000522658 SCGB2B2Q4G0G5 96 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 OR8G2PQ6IF36 304 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 FAM219AQ8IW50 185 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 OR51G1Q8NGK1 321 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 ZFAND1Q8TCF1 268 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 RNF125Q96EQ8 232 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 SLC35E1Q96K37 410 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 SAV1Q9H4B6 383 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-220ENST00000522658 FNDC4Q9H6D8 234 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-220ENST00000522658 RAB26Q9ULW5 256 aa4.41□□□□□ -1.7
PABPC1-220ENST00000522658 TEX13DA0A0J9YY54 714 aaPredicted RBP4.4□□□□□ -1.71
PABPC1-220ENST00000522658 FAM25AB3EWG3 89 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 FAM25CB3EWG5 89 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 FAM25GB3EWG6 89 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 ADAP1O75689 374 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 DUSP14O95147 198 aaKnown RBP4.4□□□□□ -1.71
PABPC1-220ENST00000522658 IGKV1-17P01599 117 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 ATP5G1P05496 136 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 ATP5G3P48201 142 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 RND3P61587 244 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 NEDD8Q15843 81 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 USF2Q15853 346 aaPredicted RBP4.4□□□□□ -1.71
PABPC1-220ENST00000522658 C2orf83Q53S99 150 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 RNASE12Q5GAN4 147 aaKnown RBP4.4□□□□□ -1.71
PABPC1-220ENST00000522658 OR8I2Q8N0Y5 310 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 ARRDC1Q8N5I2 433 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 OR10J6PQ8NGY7 276 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 NPIPB3Q92617 1050 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 SLC35B3Q9H1N7 401 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.4□□□□□ -1.71
PABPC1-220ENST00000522658 DOK5Q9P104 306 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 COMMD3Q9UBI1 195 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 KLK11Q9UBX7 282 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 PAIP2BQ9ULR5 123 aaKnown RBP4.4□□□□□ -1.71
PABPC1-220ENST00000522658 ANAPC10Q9UM13 185 aa4.4□□□□□ -1.71
PABPC1-220ENST00000522658 A0A0B4J293 547 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 ISLRO14498 428 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 BUB3O43684 328 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 NXPH3O95157 252 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 IGKV1-5P01602 117 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 HTN1P15515 57 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 TBPP20226 339 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 GDF5OSQ5U4N7 250 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 FAM78BQ5VT40 261 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-220ENST00000522658 PRSS54Q6PEW0 395 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 OR52E5Q8NH55 327 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 LRRC20Q8TCA0 184 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 FRZBQ92765 325 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 RBPMSQ93062 196 aaKnown RBP4.39□□□□□ -1.71
PABPC1-220ENST00000522658 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 TP53RKQ96S44 253 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 SLC25A22Q9H936 323 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 MRPL36Q9P0J6 103 aaKnown RBP4.39□□□□□ -1.71
PABPC1-220ENST00000522658 RYR1P21817 5038 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 FAT2Q9NYQ8 4349 aa4.39□□□□□ -1.71
PABPC1-220ENST00000522658 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 SNRPGP15A8MWD9 76 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 ANKRD65E5RJM6 399 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 IFNA5P01569 189 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 SULT1A3P0DMM9 295 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 SULT1A4P0DMN0 295 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 PSG1P11464 419 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 RAB11AP62491 216 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 RHOBP62745 196 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 FGL1Q08830 312 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 OR5I1Q13606 314 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 KLF9Q13886 244 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-220ENST00000522658 GAMTQ14353 236 aa4.38□□□□□ -1.71
PABPC1-220ENST00000522658 ZNF79Q15937 498 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms