RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ZNF320A2RRD8 509 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 MAP1LC3B2A6NCE7 125 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 H3BRN7 92 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 NMBP08949 121 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 H2AFB1P0C5Y9 115 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 HOXD3P31249 432 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-208ENST00000520561 FHITP49789 147 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 NSUN5P1Q3KNT7 163 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 KHDC3LQ587J8 217 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 CLLU1Q5K131 121 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 LCN15Q6UWW0 184 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 LINC00305Q7Z4B0 112 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 PRIMA1Q86XR5 153 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 GPHB5Q86YW7 130 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 RPP25LQ8N5L8 163 aaKnown RBP6.88□□□□□ -1.31
CSMD1-208ENST00000520561 OR11H1Q8NG94 326 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 OR1N2Q8NGR9 330 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 TMEM37Q8WXS4 190 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 TMEM158Q8WZ71 300 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 RAB24Q969Q5 203 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 UHRF2Q96PU4 802 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 MAP1LC3BQ9GZQ8 125 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 TECRQ9NZ01 308 aaKnown RBP6.88□□□□□ -1.31
CSMD1-208ENST00000520561 MRPL27Q9P0M9 148 aaKnown RBP6.88□□□□□ -1.31
CSMD1-208ENST00000520561 UFC1Q9Y3C8 167 aa6.88□□□□□ -1.31
CSMD1-208ENST00000520561 C2CD3Q4AC94 2353 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 OR7C2O60412 319 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 C8orf88P0DMB2 117 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 BMI1P35226 326 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 ZNF726P1Q15940 193 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 SPATA31B1PQ5VZV4 182 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 HIST2H2BDQ6DRA6 164 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 UNQ9165/PRO28630Q6UXU0 137 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 PATE2Q6UY27 113 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 MIR17HGQ75NE6 70 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 IQCF2Q8IXL9 164 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 SFT2D1Q8WV19 159 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 PCNPQ8WW12 178 aaKnown RBP6.87□□□□□ -1.31
CSMD1-208ENST00000520561 ZNF414Q96IQ9 312 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 SHANK2-AS3Q9BTD1 123 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 SCRT1Q9BWW7 348 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 SLC25A39Q9BZJ4 359 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-208ENST00000520561 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
CSMD1-208ENST00000520561 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
CSMD1-208ENST00000520561 CUBNO60494 3623 aa6.87□□□□□ -1.31
CSMD1-208ENST00000520561 A0A1B0GV50 99 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 A0A1W2PS18 150 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 A8MWP6 167 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 CCL24O00175 119 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 LGALS9O00182 355 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 HMGB3O15347 200 aaKnown RBP6.86□□□□□ -1.31
CSMD1-208ENST00000520561 ZNF207O43670 478 aaKnown RBP6.86□□□□□ -1.31
CSMD1-208ENST00000520561 EIF3GO75821 320 aaKnown RBP eCLIP6.86□□□□□ -1.31
CSMD1-208ENST00000520561 CXorf1O96002 111 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 STAG3L2P0CL84 134 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 STAG3L3P0CL85 134 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 ARL14EPLP0DKL9 152 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 NPPCP23582 126 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 SLURP1P55000 103 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 FGF8P55075 233 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-208ENST00000520561 SYNJ2BPP57105 145 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 KRTAP10-3P60369 221 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 UBE2L3P68036 154 aaKnown RBP6.86□□□□□ -1.31
CSMD1-208ENST00000520561 FHL3Q13643 280 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 SSX7Q7RTT5 188 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 STXBP6Q8NFX7 210 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 MBD3L1Q8WWY6 194 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 GRAMD2BQ96HH9 432 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 DUX3Q96PT4 197 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 SLC25A2Q9BXI2 301 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 HRH4Q9H3N8 390 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 TMEM231Q9H6L2 316 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
CSMD1-208ENST00000520561 TRAV1-1A0A0B4J248 108 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 TRAV5A0A0B4J249 113 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 ZNF98A6NK75 572 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 K7EMT4 169 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 M0QZ24 198 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 IFNA1P01562 189 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 PF4P02776 101 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 RPL7P18124 248 aaKnown RBP6.85□□□□□ -1.31
CSMD1-208ENST00000520561 CRYBB3P26998 211 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 MORN5Q5VZ52 161 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 LEMD1Q68G75 181 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 C12orf54Q6X4T0 127 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 IL34Q6ZMJ4 242 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 BPIFA4PQ86YQ2 179 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 OR8I2Q8N0Y5 310 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 OR4F17Q8NGA8 305 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 OR4F4Q96R69 305 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 CITED1Q99966 193 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 TMEM167BQ9NRX6 74 aa6.85□□□□□ -1.31
CSMD1-208ENST00000520561 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 ADARB2-AS1A8MUL3 147 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms