RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ZNF726P1Q15940 193 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 PRSS8Q16651 343 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 KCNIP4Q6PIL6 250 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 UNQ5815/PRO19632Q6UWF5 114 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF818PQ6ZRF7 136 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 TBC1D26Q86UD7 250 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 FAM223AQ8IWN6 122 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 OR1L8Q8NGR8 309 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM167AQ8TBQ9 72 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 LSM10Q969L4 123 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 CITED1Q99966 193 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 ATG101Q9BSB4 218 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 QTRT1Q9BXR0 403 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 FBXL15Q9H469 300 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF257Q9Y2Q1 563 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 TRAV9-1A0A075B6T8 112 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 MAP1LC3B2A6NCE7 125 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 ZFP92A6NM28 416 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 CEBPZOSA8MTT3 80 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 ATP6V0E1O15342 81 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 BRI3O95415 125 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 KRASP01116 189 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 IGHG4P01861 327 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 IL6RP08887 468 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 OR9G9P0C7N8 305 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 SAA1P0DJI8 122 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 CD33P20138 364 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 CNN1P51911 297 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 ELLP55199 621 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 ATP5IP56385 69 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 BLCAPP62952 87 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 PAFAH1B2P68402 229 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 MEF2BQ02080 365 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 DIAPH2-AS1Q14236 149 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 ADIRFQ15847 76 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 POU2AF1Q16633 256 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 PRR31Q5SQ13 230 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM144Q7Z5S9 345 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 S100A7AQ86SG5 101 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 NECAP1Q8NC96 275 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 C4orf3Q8WVX3 66 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 SRSF12Q8WXF0 261 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 DDB2Q92466 427 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 UBE2E2Q96LR5 201 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 CIB3Q96Q77 187 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 ELOVL1Q9BW60 279 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 MAP1LC3BQ9GZQ8 125 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 WNT10AQ9GZT5 417 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 PLEKHA3Q9HB20 300 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 MANBALQ9NQG1 85 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 SERTAD4Q9NUC0 356 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM140Q9NV12 185 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 FUT9Q9Y231 359 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 COL6A5A8TX70 2615 aa4.45□□□□□ -1.7
CTNNA1-220ENST00000520260 TRBV7-1A0A0A6YYK4 115 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 IGHV7-81A0A0B4J1V7 117 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 IGKV1D-13A0A0B4J2D9 117 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 CTXND1A0A1B0GTU2 59 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 LINC00473A8K010 186 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 NPIPB5A8MRT5 1133 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 TRGV3P03979 118 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 NPSP0C0P6 89 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 IGKV1-13P0DP09 117 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 MYCNOSP40205 109 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 PCP4P48539 62 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 PSMB3P49720 205 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 INSL3P51460 131 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 TPPP2P59282 170 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 YPEL3P61236 119 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 SELENOTP62341 195 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 HBG1P69891 147 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 HBG2P69892 147 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 ATP6V1FQ16864 119 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 LDLRAD2Q5SZI1 272 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 OR4A47Q6IF82 309 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 ETFRF1Q6IPR1 90 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 SLC25A24Q6NUK1 477 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 LCN15Q6UWW0 184 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 Q6ZPA2 131 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM217Q8N7C4 229 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 KLHL30-AS1Q8NEE0 82 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 FAM110DQ8TAY7 271 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM37Q8WXS4 190 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 EEF1AKMT3Q96AZ1 226 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 GPR146Q96CH1 333 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 MS4A10Q96PG2 267 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 ATP6V0BQ99437 205 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 MDFIQ99750 246 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 WDR61Q9GZS3 305 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 RBKSQ9H477 322 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF430Q9H8G1 570 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms