RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
CLK4-205ENST00000520199 F6UB75 175 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 H3BP45 60 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 MIFP14174 115 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 S100A5P33763 92 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
CLK4-205ENST00000520199 POLR2GP62487 172 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLK4-205ENST00000520199 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
CLK4-205ENST00000520199 Q6ZTC4 211 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 OR4D5Q8NGN0 318 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 SLC35E1Q96K37 410 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 TBC1D24Q9ULP9 559 aa11.19□□□□□ -0.62
CLK4-205ENST00000520199 PLA2G10O15496 165 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 ANXA7P20073 488 aaKnown RBP11.18□□□□□ -0.62
CLK4-205ENST00000520199 FXYD7P58549 80 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 TMEM41BQ5BJD5 291 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 MFFQ9GZY8 342 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 SLC25A32Q9H2D1 315 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 SAV1Q9H4B6 383 aaPredicted RBP11.18□□□□□ -0.62
CLK4-205ENST00000520199 HERC2O95714 4834 aa11.18□□□□□ -0.62
CLK4-205ENST00000520199 LINC00854A0A1B0GVQ3 168 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 A8MTW9 85 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
CLK4-205ENST00000520199 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
CLK4-205ENST00000520199 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
CLK4-205ENST00000520199 UBE2MP61081 183 aaKnown RBP11.17□□□□□ -0.62
CLK4-205ENST00000520199 SNRPD3P62318 126 aaKnown RBP11.17□□□□□ -0.62
CLK4-205ENST00000520199 SPANXN5Q5MJ07 72 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 ACOT7LQ6ZUV0 252 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
CLK4-205ENST00000520199 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 OR4E1P0C645 316 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 RAB11AP62491 216 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 ARL16Q0P5N6 197 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 SPANXN2Q5MJ10 180 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 C2CD4CQ8TF44 421 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 LINC00052Q96N35 136 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
CLK4-205ENST00000520199 PAIP2BQ9ULR5 123 aaKnown RBP11.16□□□□□ -0.62
CLK4-205ENST00000520199 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 MED6O75586 246 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 IL7P13232 177 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 PSMB3P49720 205 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 AMTNQ6UX39 209 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 C1orf158Q8N1D5 194 aa11.15□□□□□ -0.62
CLK4-205ENST00000520199 CIB3Q96Q77 187 aaPredicted RBP11.15□□□□□ -0.62
CLK4-205ENST00000520199 PKHD1P08F94 4074 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 A0A0J9YX75 114 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 IGLL5B9A064 214 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 TMEM14EPQ6UXP3 125 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 TMEM144Q7Z5S9 345 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 PLA2G2EQ9NZK7 142 aa11.14□□□□□ -0.63
CLK4-205ENST00000520199 RCL1Q9Y2P8 373 aaKnown RBP11.14□□□□□ -0.63
CLK4-205ENST00000520199 PKD1P98161 4303 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 KIAA1109Q2LD37 5005 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 NAP1L6A6NFF2 107 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 ISLRO14498 428 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 PRM2P04554 102 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 OR8I2Q8N0Y5 310 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 SMIM8Q96KF7 97 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 NEU1Q99519 415 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 RSG1Q9BU20 258 aa11.13□□□□□ -0.63
CLK4-205ENST00000520199 STRAPQ9Y3F4 350 aaKnown RBP11.13□□□□□ -0.63
CLK4-205ENST00000520199 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 H3BRN7 92 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 SSSCA1O60232 199 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
CLK4-205ENST00000520199 ORM2P19652 201 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 NUP62P37198 522 aaPredicted RBP11.12□□□□□ -0.63
CLK4-205ENST00000520199 MITD1Q8WV92 249 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 SLC25A22Q9H936 323 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 PSENENQ9NZ42 101 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
CLK4-205ENST00000520199 DYNC1H1Q14204 4646 aaKnown RBP11.12□□□□□ -0.63
CLK4-205ENST00000520199 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 C11orf94C9JXX5 98 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 MRPS12O15235 138 aaKnown RBP11.11□□□□□ -0.63
CLK4-205ENST00000520199 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
CLK4-205ENST00000520199 METTL15P1P0C7V9 234 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 PLP1P60201 277 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 TRIQKQ629K1 86 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 DOK5Q9P104 306 aa11.11□□□□□ -0.63
CLK4-205ENST00000520199 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
CLK4-205ENST00000520199 MBPP02686 304 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms