RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
PABPC1-213ENST00000519848 SHPKQ9UHJ6 478 aa6.15□□□□□ -1.42
PABPC1-213ENST00000519848 TBC1D24Q9ULP9 559 aa6.15□□□□□ -1.42
PABPC1-213ENST00000519848 PKD1P98161 4303 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 TRAV8-2A0A0B4J237 113 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 PLAC8L1A1L4L8 177 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 A8MTW9 85 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 H3BP45 60 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 RD3LP0DJH9 198 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 MED14OSP0DP75 135 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 MIFP14174 115 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 BTCP35070 178 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 SUB1P53999 127 aaKnown RBP eCLIP6.14□□□□□ -1.43
PABPC1-213ENST00000519848 PAFAH1B2P68402 229 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 MRPS10P82664 201 aaKnown RBP6.14□□□□□ -1.43
PABPC1-213ENST00000519848 TMEM217Q8N7C4 229 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 RAB2BQ8WUD1 216 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 MFFQ9GZY8 342 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 ENY2Q9NPA8 101 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 MCUBQ9NWR8 336 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
PABPC1-213ENST00000519848 TRAV10A0A0B4J240 114 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 RPS10-NUDT3A0A1W2PQS6 291 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 A0A1W2PS18 150 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 CRXO43186 299 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-213ENST00000519848 ADAP1O75689 374 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 B3GALNT1O75752 331 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 IFNA10P01566 189 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 EIF2B2P49770 351 aaKnown RBP6.13□□□□□ -1.43
PABPC1-213ENST00000519848 CCR6P51684 374 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 TMBIM6P55061 237 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 CMC4P56277 68 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-213ENST00000519848 LYZP61626 148 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 MORN3Q6PF18 240 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-213ENST00000519848 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 TMED4Q7Z7H5 227 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 LGI3Q8N145 548 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 THAP8Q8NA92 274 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 Q8WTZ3 238 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 PRRT1Q99946 306 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 SAV1Q9H4B6 383 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-213ENST00000519848 TMEM231Q9H6L2 316 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 FLVCR2Q9UPI3 526 aa6.13□□□□□ -1.43
PABPC1-213ENST00000519848 IGHV3OR16-12A0A075B7B8 117 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 TRAV30A0A087WSZ9 112 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 DEFB131BA0A096LNP1 70 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 A0A0J9YX75 114 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 M0R2N4 97 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 ATG12O94817 140 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 CD5P06127 495 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 PAX9P55771 341 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 UBE2MP61081 183 aaKnown RBP6.12□□□□□ -1.43
PABPC1-213ENST00000519848 BAK1Q16611 211 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 FAM78BQ5VT40 261 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 MORN5Q5VZ52 161 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 CCDC190Q86UF4 302 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 RNF182Q8N6D2 247 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 LRTM2Q8N967 370 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 MCFD2Q8NI22 146 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 TMPRSS5Q9H3S3 457 aa6.12□□□□□ -1.43
PABPC1-213ENST00000519848 IGLV2-18A0A075B6J9 118 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 FABP12A6NFH5 140 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 ZFP92A6NM28 416 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 SFT2D2O95562 160 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 IFNA4P05014 189 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 NKX2-1P43699 371 aaPredicted RBP6.11□□□□□ -1.43
PABPC1-213ENST00000519848 EMP1P54849 157 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 ARL16Q0P5N6 197 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 FAM222AQ5U5X8 452 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 GGNBP1Q5YKI7 109 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 Q6ZR54 194 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 ACOT7LQ6ZUV0 252 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 BAP18Q8IXM2 172 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 OR1S1Q8NH92 325 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 LINC00052Q96N35 136 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 UHRF2Q96PU4 802 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 TRGV9Q99603 122 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 RNF126Q9BV68 326 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 SRRQ9GZT4 340 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 DKK2Q9UBU2 259 aa6.11□□□□□ -1.43
PABPC1-213ENST00000519848 C11orf94C9JXX5 98 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 H3BRN7 92 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 M0R2Z0 102 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 WRBO00258 174 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
PABPC1-213ENST00000519848 HOXB5P09067 269 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 SNRPCP09234 159 aaKnown RBP6.1□□□□□ -1.43
PABPC1-213ENST00000519848 VAMP1P23763 118 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 PSMB3P49720 205 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 LINC00310P59036 64 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 POLR2GP62487 172 aaKnown RBP eCLIP6.1□□□□□ -1.43
PABPC1-213ENST00000519848 OR8G2PQ6IF36 304 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 FOXI2Q6ZQN5 318 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 OR4D5Q8NGN0 318 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 C15orf40Q8WUR7 153 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 NEU1Q99519 415 aa6.1□□□□□ -1.43
PABPC1-213ENST00000519848 PARD6GQ9BYG4 376 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms