RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 NAP1L6A6NFF2 107 aa18.27■□□□□ 0.52
VEGFA-220ENST00000519767 ISLRO14498 428 aa18.27■□□□□ 0.52
VEGFA-220ENST00000519767 NEU1Q99519 415 aa18.27■□□□□ 0.52
VEGFA-220ENST00000519767 SMIM9A6NGZ8 99 aa18.26■□□□□ 0.51
VEGFA-220ENST00000519767 INPP1P49441 399 aa18.26■□□□□ 0.51
VEGFA-220ENST00000519767 MEOX2P50222 304 aa18.26■□□□□ 0.51
VEGFA-220ENST00000519767 Q6ZTC4 211 aa18.26■□□□□ 0.51
VEGFA-220ENST00000519767 COQ8AQ8NI60 647 aa18.26■□□□□ 0.51
VEGFA-220ENST00000519767 STRAPQ9Y3F4 350 aaKnown RBP18.26■□□□□ 0.51
VEGFA-220ENST00000519767 PRSS46E5RG02 174 aa18.25■□□□□ 0.51
VEGFA-220ENST00000519767 SOCS3O14543 225 aa18.25■□□□□ 0.51
VEGFA-220ENST00000519767 SPANXN5Q5MJ07 72 aa18.25■□□□□ 0.51
VEGFA-220ENST00000519767 SRRQ9GZT4 340 aa18.25■□□□□ 0.51
VEGFA-220ENST00000519767 KMT2AQ03164 3969 aa18.25■□□□□ 0.51
VEGFA-220ENST00000519767 C9orf170A2RU37 121 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 GALR1P47211 349 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 ID3Q02535 119 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 GDF5OSQ5U4N7 250 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 EBLN2Q6P2I7 272 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 ZNF705AQ6ZN79 300 aaPredicted RBP18.24■□□□□ 0.51
VEGFA-220ENST00000519767 BPIFCQ8NFQ6 507 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 RNF126Q9BV68 326 aa18.24■□□□□ 0.51
VEGFA-220ENST00000519767 RBM38Q9H0Z9 239 aaKnown RBP18.24■□□□□ 0.51
VEGFA-220ENST00000519767 TMEM189A5PLL7 270 aa18.23■□□□□ 0.51
VEGFA-220ENST00000519767 OR4D5Q8NGN0 318 aa18.23■□□□□ 0.51
VEGFA-220ENST00000519767 VPS13DQ5THJ4 4388 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 ZNF705FA8MVS1 300 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-220ENST00000519767 NDUFB6O95139 128 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 IFNA21P01568 189 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 IGKV3-20P01619 116 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 ZNF705DP0CH99 300 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-220ENST00000519767 ZNF705BP0CI00 300 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-220ENST00000519767 PAX9P55771 341 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 C12orf74Q32Q52 190 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 TRIQKQ629K1 86 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 OR4B1Q8NGF8 309 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 GPR82Q96P67 336 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 RPRMQ9NS64 109 aa18.22■□□□□ 0.51
VEGFA-220ENST00000519767 ZNF98A6NK75 572 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 PRR20EP86478 221 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 PRR20CP86479 221 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 PRR20DP86480 221 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 PRR20BP86481 221 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 PRR20AP86496 221 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 PSG9Q00887 426 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 AKR1C1Q04828 323 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 TMEM144Q7Z5S9 345 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 OR1B1Q8NGR6 318 aa18.21■□□□□ 0.51
VEGFA-220ENST00000519767 IGHV4-4A0A075B6R2 117 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 DEFB131BA0A096LNP1 70 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 CENPXA8MT69 81 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 ORM2P19652 201 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 DEFB1P60022 68 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 C16orf92Q96LL3 132 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 RSG1Q9BU20 258 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 TMEM147Q9BVK8 224 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 CELA1Q9UNI1 258 aa18.2■□□□□ 0.5
VEGFA-220ENST00000519767 ADAP1O75689 374 aa18.19■□□□□ 0.5
VEGFA-220ENST00000519767 SPART-AS1P0CW21 52 aa18.19■□□□□ 0.5
VEGFA-220ENST00000519767 BAK1Q16611 211 aa18.19■□□□□ 0.5
VEGFA-220ENST00000519767 SLC25A22Q9H936 323 aa18.19■□□□□ 0.5
VEGFA-220ENST00000519767 A0A0J9YX75 114 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 OR4E1P0C645 316 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 POLR2GP62487 172 aaKnown RBP eCLIP18.18■□□□□ 0.5
VEGFA-220ENST00000519767 CNPY1Q3B7I2 92 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 FAM78BQ5VT40 261 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 ACOT7LQ6ZUV0 252 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 ZNF709Q8N972 641 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 SMIM8Q96KF7 97 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 SLC25A32Q9H2D1 315 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 PSENENQ9NZ42 101 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 RFNGQ9Y644 331 aa18.18■□□□□ 0.5
VEGFA-220ENST00000519767 H3BP45 60 aa18.17■□□□□ 0.5
VEGFA-220ENST00000519767 FXYD7P58549 80 aa18.17■□□□□ 0.5
VEGFA-220ENST00000519767 C7orf50Q9BRJ6 194 aaKnown RBP18.17■□□□□ 0.5
VEGFA-220ENST00000519767 FLVCR2Q9UPI3 526 aa18.17■□□□□ 0.5
VEGFA-220ENST00000519767 GOLT1BQ9Y3E0 138 aa18.17■□□□□ 0.5
VEGFA-220ENST00000519767 FRAS1Q86XX4 4008 aa18.17■□□□□ 0.5
VEGFA-220ENST00000519767 IGHV3OR16-12A0A075B7B8 117 aa18.16■□□□□ 0.5
VEGFA-220ENST00000519767 TEX48A0A1B0GUV7 120 aa18.16■□□□□ 0.5
VEGFA-220ENST00000519767 AMBPP02760 352 aa18.16■□□□□ 0.5
VEGFA-220ENST00000519767 GATA2P23769 480 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-220ENST00000519767 TMEM182Q6ZP80 229 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-220ENST00000519767 S100A7AQ86SG5 101 aa18.16■□□□□ 0.5
VEGFA-220ENST00000519767 SLC35B3Q9H1N7 401 aa18.16■□□□□ 0.5
VEGFA-220ENST00000519767 DNAH10Q8IVF4 4471 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 IL5P05113 134 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 SELENOTP62341 195 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 C4orf46Q504U0 113 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 ZNF767PQ75MW2 155 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 NDUFAF3Q9BU61 184 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 DOK5Q9P104 306 aa18.15■□□□□ 0.5
VEGFA-220ENST00000519767 SMCO3A2RU48 225 aa18.14■□□□□ 0.49
VEGFA-220ENST00000519767 F6UB75 175 aa18.14■□□□□ 0.49
VEGFA-220ENST00000519767 EMP1P54849 157 aa18.14■□□□□ 0.49
VEGFA-220ENST00000519767 CYP2G1PQ6ZSU1 146 aa18.14■□□□□ 0.49
VEGFA-220ENST00000519767 C20orf173Q96LM9 149 aa18.14■□□□□ 0.49
VEGFA-220ENST00000519767 C17orf77Q96MU5 243 aa18.14■□□□□ 0.49
VEGFA-220ENST00000519767 LINC00854A0A1B0GVQ3 168 aa18.13■□□□□ 0.49
VEGFA-220ENST00000519767 FNDC10F2Z333 226 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms