RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 LLPHQ9BRT6 129 aaKnown RBP-0.47□□□□□ -2.48
PCM1-208ENST00000518877 RNASE7Q9H1E1 156 aaKnown RBP-0.47□□□□□ -2.48
PCM1-208ENST00000518877 TMEM133Q9H2Q1 129 aa-0.47□□□□□ -2.48
PCM1-208ENST00000518877 PCTPQ9UKL6 214 aa-0.47□□□□□ -2.48
PCM1-208ENST00000518877 F8P00451 2351 aa-0.47□□□□□ -2.49
PCM1-208ENST00000518877 C9orf84Q5VXU9 1444 aa-0.47□□□□□ -2.49
PCM1-208ENST00000518877 OBSL1O75147 1896 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 CACNA1AO00555 2505 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 IGLV3-32A0A0A0MS00 114 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 TIMM17BO60830 172 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 CALB1P05937 261 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 SMIM17P0DL12 118 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 CD79AP11912 226 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 AP2S1P53680 142 aaPredicted RBP-0.48□□□□□ -2.49
PCM1-208ENST00000518877 FXYD4P59646 89 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 ASB16-AS1Q495Z4 193 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 SLC30A7Q8NEW0 376 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 LYSMD1Q96S90 227 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 TMEM138Q9NPI0 162 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 MED29Q9NX70 200 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 CACNA1CQ13936 2221 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 ASXL3Q9C0F0 2248 aa-0.48□□□□□ -2.49
PCM1-208ENST00000518877 DSTQ03001 7570 aaKnown RBP-0.48□□□□□ -2.49
PCM1-208ENST00000518877 TRAV23DV6A0A075B6W5 121 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.49□□□□□ -2.49
PCM1-208ENST00000518877 H3BRM9 83 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 M0QX08 132 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 PIRO00625 290 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 CNIH1O95406 144 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 PPYP01298 95 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 SERPINE1P05121 402 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 HIST3H3Q16695 136 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 C1orf134Q5TEV5 83 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 PDZD9Q8IXQ8 264 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 GDPD1Q8N9F7 314 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 GGACTQ9BVM4 153 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 TMEM126AQ9H061 195 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 FBXO5Q9UKT4 447 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 TNS3Q68CZ2 1445 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 WNK2Q9Y3S1 2297 aa-0.49□□□□□ -2.49
PCM1-208ENST00000518877 MUC12Q9UKN1 5478 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 ZNF727A8MUV8 499 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 E7EUB6 86 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 TTRP02766 147 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 RBP1P09455 135 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 RHOBP62745 196 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 QRFPP83859 136 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 SPATA45Q537H7 98 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 Q86TA4 180 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 KRT222Q8N1A0 295 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 OR10K1Q8NGX5 313 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 SLC25A40Q8TBP6 338 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 C8orf76Q96K31 380 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 UQCC1Q9NVA1 299 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 USE1Q9NZ43 259 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 CELSR2Q9HCU4 2923 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 ARHGEF11O15085 1522 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 MGAMO43451 1857 aa-0.5□□□□□ -2.49
PCM1-208ENST00000518877 A0A087WUJ7 227 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 JMJD7-PLA2G4BH0Y9G9 81 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 CYB5BO43169 146 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 CCL4P13236 92 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 ANP32AP39687 249 aaKnown RBP-0.51□□□□□ -2.49
PCM1-208ENST00000518877 DSCR4P56555 118 aaPredicted RBP-0.51□□□□□ -2.49
PCM1-208ENST00000518877 C2orf82Q6UX34 121 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 TEN1Q86WV5 123 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 ABCA2Q9BZC7 2435 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 CCDC90BQ9GZT6 254 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 GUCA1BQ9UMX6 200 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 ATP6V1DQ9Y5K8 247 aa-0.51□□□□□ -2.49
PCM1-208ENST00000518877 MYO5AQ9Y4I1 1855 aaKnown RBP-0.52□□□□□ -2.49
PCM1-208ENST00000518877 SNAPC4Q5SXM2 1469 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 RFX7Q2KHR2 1363 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 MUC2Q02817 5179 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 hCG_1818297A0A087WSY0 165 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 A8MT66 165 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 IFNA5P01569 189 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 IGLV1-51P01701 117 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 COX7CP15954 63 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 Q6Q795 121 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 C4orf22Q6V702 233 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 PRR15Q8IV56 129 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 OR5D14Q8NGL3 314 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 DCUN1D1Q96GG9 259 aa-0.52□□□□□ -2.49
PCM1-208ENST00000518877 CCDC94Q9BW85 323 aaPredicted RBP-0.52□□□□□ -2.49
PCM1-208ENST00000518877 JMJD1CQ15652 2540 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 hADV38S2A0JD32 116 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 ERC2-IT1O76042 136 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 LY6G6CO95867 125 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 CXCL8P10145 99 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 SULT1A1P50225 295 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 NKX2-5P52952 324 aaPredicted RBP-0.53□□□□□ -2.49
PCM1-208ENST00000518877 CT55Q8WUE5 264 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 C2orf50Q96LR7 162 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 CCL19Q99731 98 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 PARD6GQ9BYG4 376 aaPredicted RBP-0.53□□□□□ -2.49
PCM1-208ENST00000518877 VPS29Q9UBQ0 182 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 TENM4Q6N022 2769 aa-0.53□□□□□ -2.49
PCM1-208ENST00000518877 CLDN24A6NM45 220 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 NDUFB3O43676 98 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms