RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 CHD3Q12873 2000 aaKnown RBP4.11□□□□□ -1.75
HDAC2-204ENST00000518756 FREM1Q5H8C1 2179 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 SHANK1Q9Y566 2161 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 LAMA3Q16787 3333 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 TEX50A0A1B0GTY4 177 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 TMEM8BA6NDV4 472 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF705FA8MVS1 300 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 PRSS46E5RG02 174 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 FCN1O00602 326 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ISLRO14498 428 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 NDUFA7O95182 113 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 HLA-DQA1P01909 254 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 AMBPP02760 352 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR4A8P0C604 315 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR10J4P0C629 311 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF705DP0CH99 300 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF705BP0CI00 300 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 HIST1H1EP10412 219 aaKnown RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 UBE2G1P62253 170 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR10J3Q5JRS4 329 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 IBA57Q5T440 356 aaKnown RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 C10orf113Q5VZT2 155 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF562Q6V9R5 426 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 MRPL52Q86TS9 123 aaKnown RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 LRP11Q86VZ4 500 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 VKORC1L1Q8N0U8 176 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 GBGT1Q8N5D6 347 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 LINC00311Q8N616 119 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 SIGLECL1Q8N7X8 197 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF439Q8NDP4 499 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 DEFB108BQ8NET1 73 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR5AU1Q8NGC0 362 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR2D3Q8NGH3 330 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR1L6Q8NGR2 347 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 MRAPQ8TCY5 172 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 H1FXQ92522 213 aaKnown RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 CCL13Q99616 98 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 DYNLRB1Q9NP97 96 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 AMMECR1Q9Y4X0 333 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-204ENST00000518756 SDK1Q7Z5N4 2213 aa4.1□□□□□ -1.75
HDAC2-204ENST00000518756 TANC2Q9HCD6 1990 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 DOCK7Q96N67 2140 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 SNURFLB1AK76 121 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 SLC31A2O15432 143 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 CT45A6P0DMU7 189 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 CT45A5P0DMU8 189 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 CT45A7P0DMV0 189 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 GZMBP10144 247 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 MGST1P10620 155 aaKnown RBP4.09□□□□□ -1.75
HDAC2-204ENST00000518756 BRS3P32247 399 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 PPOXP50336 477 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
HDAC2-204ENST00000518756 UBE2L3P68036 154 aaKnown RBP4.09□□□□□ -1.75
HDAC2-204ENST00000518756 Q0VG73 95 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 TMEM183BQ1AE95 376 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 CLEC12BQ2HXU8 276 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 PAPPA-AS1Q5QFB9 102 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 SIGLEC15Q6ZMC9 328 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 MMD2Q8IY49 270 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 TMEM167AQ8TBQ9 72 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 BORCS7Q96B45 105 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 RNF5Q99942 180 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 PAXXQ9BUH6 204 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 NDUFA4L2Q9NRX3 87 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 ZNF586Q9NXT0 402 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 C1RLQ9NZP8 487 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 NAT8BQ9UHF3 227 aa4.09□□□□□ -1.75
HDAC2-204ENST00000518756 SPTBN5Q9NRC6 3674 aaKnown RBP4.09□□□□□ -1.76
HDAC2-204ENST00000518756 KIAA2026Q5HYC2 2103 aa4.09□□□□□ -1.76
HDAC2-204ENST00000518756 TRAV3A0A0B4J244 114 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 IZUMO1RA6ND01 250 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 TMEM178BH3BS89 294 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 M0R143 59 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 ENSAO43768 121 aaKnown RBP4.08□□□□□ -1.76
HDAC2-204ENST00000518756 IGHV3-7P01780 117 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 TFF1P04155 84 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 LINC00869P0C866 280 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 RD3LP0DJH9 198 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 SAA1P0DJI8 122 aaPredicted RBP4.08□□□□□ -1.76
HDAC2-204ENST00000518756 RNASE2P10153 161 aaKnown RBP4.08□□□□□ -1.76
HDAC2-204ENST00000518756 ESDP10768 282 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 PTPRBP23467 1997 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 CRYBB3P26998 211 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 PLP1P60201 277 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 HERV-K104P63124 156 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 CX3CL1P78423 397 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 CCL8P80075 99 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 KRTAP24-1Q3LI83 254 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 CENPWQ5EE01 88 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 GCSAMLQ5JQS6 135 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 GFRALQ6UXV0 394 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 C19orf35Q6ZS72 473 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 FAM231DQ6ZW35 169 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 MIR17HGQ75NE6 70 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 SMIM29Q86T20 159 aa4.08□□□□□ -1.76
HDAC2-204ENST00000518756 KLHDC1Q8N7A1 406 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms