RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RBMY1FQ15415 496 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 KDM4DQ6B0I6 523 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 EIF5AL1Q6IS14 154 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 RPL22L1Q6P5R6 122 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF880Q6PDB4 577 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MORN3Q6PF18 240 aaPredicted RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 GLIPR1L1Q6UWM5 242 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 SHISA6Q6ZSJ9 500 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MSRB3Q8IXL7 192 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 EXOC3-AS1Q8N2X6 119 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM75Q8N9X5 138 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 OR8A1Q8NGG7 326 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 OR10D4PQ8NGN7 298 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 OR1J4Q8NGS1 313 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 OR5H2Q8NGV7 314 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 NAT14Q8WUY8 206 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TOMM6Q96B49 74 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 IGF2BP2-AS1Q96M15 143 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MRPL57Q9BQC6 102 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 SCRT1Q9BWW7 348 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 C1QTNF6Q9BXI9 259 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 WDR61Q9GZS3 305 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 AICDAQ9GZX7 198 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MARCOQ9UEW3 520 aaPredicted RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TAC3Q9UHF0 121 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 PCTPQ9UKL6 214 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 AP4S1Q9Y587 144 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 IER3IP1Q9Y5U9 82 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ZNFX1Q9P2E3 1918 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 BDP1A6H8Y1 2624 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 WDFY4Q6ZS81 3184 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 IGHV3-74A0A0B4J1X5 117 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TRBV7-6A0A0J9YX20 115 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 A0A1B0GW64 132 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM72A0PK05 275 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 IZUMO1RA6ND01 250 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF670-ZNF695F2Z2N8 137 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 H3BQF6 201 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 M0R381 172 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 CCL25O15444 150 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 OR2T1O43869 369 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TRGC2P03986 189 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TRAPPC2P0DI81 140 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TRAPPC2BP0DI82 140 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 LGALS3P17931 250 aaKnown RBP2.11□□□□□ -2.07
VPS13B-207ENST00000518569 CRYGSP22914 178 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF138P52744 262 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 RBM11P57052 281 aaKnown RBP2.11□□□□□ -2.07
VPS13B-207ENST00000518569 RPS11P62280 158 aaKnown RBP eCLIP2.11□□□□□ -2.07
VPS13B-207ENST00000518569 BTG2P78543 158 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 SLC38A11Q08AI6 406 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 HSD52Q0P140 79 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 HES1Q14469 280 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 ELOCQ15369 112 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 CCSMST1Q4G0I0 132 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 HRCT1Q6UXD1 115 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 Q6ZR03 302 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 WDR86Q86TI4 376 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 SNX29P2Q8IUI4 249 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 ZFP62Q8NB50 900 aaPredicted RBP2.11□□□□□ -2.07
VPS13B-207ENST00000518569 OR4K5Q8NGD3 323 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 OR10AC1Q8NH08 325 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 SGMS2Q8NHU3 365 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 DEDD2Q8WXF8 326 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 KLK6Q92876 244 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 SLC25A46Q96AG3 418 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 FXYD5Q96DB9 178 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 OR4C12Q96R67 309 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TIMM17AQ99595 171 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TBL1YQ9BQ87 522 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 MIEN1Q9BRT3 115 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 GGTLC1Q9BX51 225 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 SNHG12Q9BXW3 62 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 DUSP21Q9H596 190 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 MED9Q9NWA0 146 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 AMMECR1Q9Y4X0 333 aaPredicted RBP2.11□□□□□ -2.07
VPS13B-207ENST00000518569 HSPE1-MOB4S4R3N1 261 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 LRP4O75096 1905 aa2.11□□□□□ -2.07
VPS13B-207ENST00000518569 LAMB2P55268 1798 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 MUC6Q6W4X9 2439 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 WDR87Q6ZQQ6 2873 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 GBF1Q92538 1859 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 IGLV1-50A0A075B6I6 118 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 IGKV6-21A0A0C4DH24 114 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 A0A0G2JMM0 328 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 IGHV5-10-1A0A0J9YXX1 117 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 A0A1W2PP18 115 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 A0A1W2PPB8 328 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 OR2T8A6NH00 312 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 KIR3DP1A8MWS1 328 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 J3QQQ9 107 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 DNASE2O00115 360 aaPredicted RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 NDUFB3O43676 98 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 GABARAPO95166 117 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 SLC25A14O95258 325 aaPredicted RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 KRASP01116 189 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms