RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 A0A1B0GV50 99 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 A0A1W2PPV4 95 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 LINC00862A6NCI5 91 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 TEX46H3BTG2 121 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 I3L521 148 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 HMGB3O15347 200 aaKnown RBP8.13□□□□□ -1.11
PABPC1-203ENST00000517921 ATP6V1G1O75348 118 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 STAG3L3P0CL85 134 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 CD28P10747 220 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 CDX1P47902 265 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-203ENST00000517921 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-203ENST00000517921 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 C10orf113Q5VZT2 155 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-203ENST00000517921 SFT2D1Q8WV19 159 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 UHRF2Q96PU4 802 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 HRH4Q9H3N8 390 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 MRPL27Q9P0M9 148 aaKnown RBP8.13□□□□□ -1.11
PABPC1-203ENST00000517921 HIGD1AQ9Y241 93 aa8.13□□□□□ -1.11
PABPC1-203ENST00000517921 IGHV4OR15-8A0A075B7B6 117 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 A0A087WW49 117 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 H3BRN7 92 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 NDUFA4O00483 81 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 GGCTO75223 188 aaKnown RBP8.12□□□□□ -1.11
PABPC1-203ENST00000517921 HBE1P02100 147 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 KHDC1LQ5JSQ8 128 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 HIST2H2BDQ6DRA6 164 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 C12orf54Q6X4T0 127 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 LINC00305Q7Z4B0 112 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 C4orf3Q8WVX3 66 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 FAM167A-AS1Q96KT0 104 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 SLC25A2Q9BXI2 301 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 SLC25A39Q9BZJ4 359 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-203ENST00000517921 MED9Q9NWA0 146 aa8.12□□□□□ -1.11
PABPC1-203ENST00000517921 IGHV3OR16-8A0A075B7F1 116 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 TRAV5A0A0B4J249 113 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 A0A1B0GUS0 222 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 ARL14EPLP0DKL9 152 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 CCL20P78556 96 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 UNQ9165/PRO28630Q6UXU0 137 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 IL34Q6ZMJ4 242 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 COMMD7Q86VX2 200 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 C11orf44Q8N8P7 122 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 KLHL30-AS1Q8NEE0 82 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 TMEM190Q8WZ59 177 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 SHANK2-AS3Q9BTD1 123 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 SCRT1Q9BWW7 348 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 TECRQ9NZ01 308 aaKnown RBP8.11□□□□□ -1.11
PABPC1-203ENST00000517921 RABAC1Q9UI14 185 aa8.11□□□□□ -1.11
PABPC1-203ENST00000517921 CXorf1O96002 111 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
PABPC1-203ENST00000517921 GCHFRP30047 84 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 TAS2R45P59539 299 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 DEFB136Q30KP8 78 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 LEMD1Q68G75 181 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 CITED2Q99967 270 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-203ENST00000517921 TMPRSS5Q9H3S3 457 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 PFDN2Q9UHV9 154 aa8.1□□□□□ -1.11
PABPC1-203ENST00000517921 TSSC4Q9Y5U2 329 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-203ENST00000517921 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 ZNF98A6NK75 572 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 OR7C2O60412 319 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 GP9P14770 177 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 RPEL1Q2QD12 228 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 PQLC2Q6ZP29 291 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 GPHB5Q86YW7 130 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 SLC7A5P1Q8MH63 180 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 MARC2Q969Z3 335 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 C20orf24Q9BUV8 137 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 U3KQE9 123 aa8.09□□□□□ -1.11
PABPC1-203ENST00000517921 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 LINC01619G3V211 115 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 ZNF207O43670 478 aaKnown RBP8.08□□□□□ -1.12
PABPC1-203ENST00000517921 PYYP10082 97 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 ZP3P21754 424 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 CRYBB3P26998 211 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 HOXD3P31249 432 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-203ENST00000517921 SLURP1P55000 103 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 FOXL1Q12952 345 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 PMS2P11Q13670 270 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 REC114Q7Z4M0 266 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 S100A7AQ86SG5 101 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 IQCF2Q8IXL9 164 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 OR11H1Q8NG94 326 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 SUN5Q8TC36 379 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 FXYD5Q96DB9 178 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 METTL26Q96S19 204 aa8.08□□□□□ -1.12
PABPC1-203ENST00000517921 PAXXQ9BUH6 204 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms