RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TRAV10A0A0B4J240 114 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 IGLL5B9A064 214 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 ISLRO14498 428 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 SOCS3O14543 225 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 NDUFB6O95139 128 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 S100A7P31151 101 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 MEOX2P50222 304 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 SPANXN5Q5MJ07 72 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 SPATA31B1PQ5VZV4 182 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 Q6ZTC4 211 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 LINC00052Q96N35 136 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 CLUHP3Q96NS8 147 aa12.63□□□□□ -0.39
DDX41-217ENST00000515562 STRAPQ9Y3F4 350 aaKnown RBP12.63□□□□□ -0.39
DDX41-217ENST00000515562 C9orf170A2RU37 121 aa12.62□□□□□ -0.39
DDX41-217ENST00000515562 H3BP45 60 aa12.62□□□□□ -0.39
DDX41-217ENST00000515562 DEDDO75618 318 aa12.62□□□□□ -0.39
DDX41-217ENST00000515562 BPIFCQ8NFQ6 507 aa12.62□□□□□ -0.39
DDX41-217ENST00000515562 CENPXA8MT69 81 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 ADAP1O75689 374 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 IFNA21P01568 189 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 GALR1P47211 349 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 BAK1Q16611 211 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 GDF5OSQ5U4N7 250 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
DDX41-217ENST00000515562 ACOT7LQ6ZUV0 252 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 NEU1Q99519 415 aa12.61□□□□□ -0.39
DDX41-217ENST00000515562 PAX9P55771 341 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 ID3Q02535 119 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 EBLN2Q6P2I7 272 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 OR4D5Q8NGN0 318 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 GPR82Q96P67 336 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 SLC25A32Q9H2D1 315 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 RPRMQ9NS64 109 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 APLNQ9ULZ1 77 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 CELA1Q9UNI1 258 aa12.6□□□□□ -0.39
DDX41-217ENST00000515562 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 ZNF98A6NK75 572 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
DDX41-217ENST00000515562 IGKV3-20P01619 116 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 OR4E1P0C645 316 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
DDX41-217ENST00000515562 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
DDX41-217ENST00000515562 DEFB1P60022 68 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 POLR2GP62487 172 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDX41-217ENST00000515562 TMEM144Q7Z5S9 345 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 ZNF709Q8N972 641 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 OR4B1Q8NGF8 309 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 C16orf92Q96LL3 132 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 C7orf50Q9BRJ6 194 aaKnown RBP12.59□□□□□ -0.39
DDX41-217ENST00000515562 TMEM147Q9BVK8 224 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 SLC25A22Q9H936 323 aa12.59□□□□□ -0.39
DDX41-217ENST00000515562 IGHV4-4A0A075B6R2 117 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 SSSCA1O60232 199 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 ORM2P19652 201 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 C4orf46Q504U0 113 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 OR1B1Q8NGR6 318 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 PSENENQ9NZ42 101 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 FLVCR2Q9UPI3 526 aa12.58□□□□□ -0.4
DDX41-217ENST00000515562 A0A0J9YX75 114 aa12.57□□□□□ -0.4
DDX41-217ENST00000515562 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
DDX41-217ENST00000515562 AMBPP02760 352 aa12.57□□□□□ -0.4
DDX41-217ENST00000515562 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
DDX41-217ENST00000515562 FAM78BQ5VT40 261 aa12.57□□□□□ -0.4
DDX41-217ENST00000515562 FRAS1Q86XX4 4008 aa12.57□□□□□ -0.4
DDX41-217ENST00000515562 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 DEFB131BA0A096LNP1 70 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 TEX48A0A1B0GUV7 120 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 LINC00854A0A1B0GVQ3 168 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 IL5P05113 134 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
DDX41-217ENST00000515562 BTCP35070 178 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 FXYD7P58549 80 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 PRR20EP86478 221 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 PRR20CP86479 221 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 PRR20DP86480 221 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 PRR20BP86481 221 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 PRR20AP86496 221 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 PSG9Q00887 426 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 CYP2G1PQ6ZSU1 146 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 SMIM8Q96KF7 97 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 SDHCQ99643 169 aaPredicted RBP12.56□□□□□ -0.4
DDX41-217ENST00000515562 RSG1Q9BU20 258 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 DOK5Q9P104 306 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 GOLT1BQ9Y3E0 138 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 RFNGQ9Y644 331 aa12.56□□□□□ -0.4
DDX41-217ENST00000515562 F6UB75 175 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 IL7P13232 177 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 ANXA7P20073 488 aaKnown RBP12.55□□□□□ -0.4
DDX41-217ENST00000515562 RAP2BP61225 183 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 SELENOTP62341 195 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 DLK1P80370 383 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.55□□□□□ -0.4
DDX41-217ENST00000515562 TMEM182Q6ZP80 229 aaPredicted RBP12.55□□□□□ -0.4
DDX41-217ENST00000515562 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms