RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZNF600Q6ZNG1 722 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 FAM210BQ96KR6 192 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 PYGO2Q9BRQ0 406 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
VCAN-211ENST00000513984 DOPEY2Q9Y3R5 2298 aa11.68□□□□□ -0.54
VCAN-211ENST00000513984 CTSGP08311 255 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 S100PP25815 95 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 SRP14P37108 136 aaKnown RBP11.67□□□□□ -0.54
VCAN-211ENST00000513984 GNG4P50150 75 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 RHOGP84095 191 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 C15orf32Q32M92 178 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 TEX38Q6PEX7 206 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 S100A7AQ86SG5 101 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 OR2T8A6NH00 312 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 PEX7O00628 323 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 HIST1H1EP10412 219 aaKnown RBP11.67□□□□□ -0.54
VCAN-211ENST00000513984 TAS2R60P59551 318 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
VCAN-211ENST00000513984 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
VCAN-211ENST00000513984 NECAP1Q8NC96 275 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 CDC42EP3Q9UKI2 254 aa11.67□□□□□ -0.54
VCAN-211ENST00000513984 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 M0QZK8 103 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 TGOLN2O43493 480 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 Q5PR19 223 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 IMMP2LQ96T52 175 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 CENPEQ02224 2701 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 ZFHX3Q15911 3703 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
VCAN-211ENST00000513984 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
VCAN-211ENST00000513984 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.54
VCAN-211ENST00000513984 IGF1P05019 195 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 HNF1AP20823 631 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 ADMP35318 185 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 CNN1P51911 297 aaKnown RBP11.65□□□□□ -0.54
VCAN-211ENST00000513984 LY6EQ16553 131 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 MBD6Q96DN6 1003 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 CHRDL1Q9BU40 450 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 ABCA12Q86UK0 2595 aa11.65□□□□□ -0.54
VCAN-211ENST00000513984 MRPS12O15235 138 aaKnown RBP11.65□□□□□ -0.55
VCAN-211ENST00000513984 TGFAP01135 160 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 IGLV2-8P01709 118 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 IGHG2P01859 326 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.55
VCAN-211ENST00000513984 IGHV4-31P0DP07 118 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 KCNIP4Q6PIL6 250 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 MAPK1IP1LQ8NDC0 245 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 OR10G8Q8NGN5 311 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 TMEM190Q8WZ59 177 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 Q9H3A6 140 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 GAR1Q9NY12 217 aaKnown RBP11.65□□□□□ -0.55
VCAN-211ENST00000513984 EPDR1Q9UM22 224 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 RNF24Q9Y225 148 aa11.65□□□□□ -0.55
VCAN-211ENST00000513984 PGPA6NDG6 321 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 SLC25A5P05141 298 aaKnown RBP11.64□□□□□ -0.55
VCAN-211ENST00000513984 IGLC2P0DOY2 106 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 ZNF414Q96IQ9 312 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 CCDC140Q96MF4 163 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
VCAN-211ENST00000513984 J3QKU1 62 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 GCGP01275 180 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 FOXL1Q12952 345 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 BCL6BQ8N143 479 aaPredicted RBP11.63□□□□□ -0.55
VCAN-211ENST00000513984 EEF1AKMT3Q96AZ1 226 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 FSHBP01225 129 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 TYMSP04818 313 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 GPR183P32249 361 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 GNG5P63218 68 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 C9orf152Q5JTZ5 239 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 ATG101Q9BSB4 218 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 SAV1Q9H4B6 383 aaPredicted RBP11.63□□□□□ -0.55
VCAN-211ENST00000513984 SRD5A3Q9H8P0 318 aa11.63□□□□□ -0.55
VCAN-211ENST00000513984 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 H3BTX0 84 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 BRI3O95415 125 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 OR5I1Q13606 314 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms