RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ZNF616Q08AN1 781 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM267Q0VDI3 215 aaPredicted RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 PJVKQ0ZLH3 352 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 PRSS8Q16651 343 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM41BQ5BJD5 291 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 C9orf152Q5JTZ5 239 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 Q6ZRG5 221 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 VMO1Q7Z5L0 202 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 CENPVQ7Z7K6 275 aaPredicted RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 SLC7A5P1Q8MH63 180 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 C11orf42Q8N5U0 333 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 OR4P4Q8NGL7 312 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 FAM213BQ8TBF2 198 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 TAF15Q92804 592 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 C5orf30Q96GV9 206 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 NARS2Q96I59 477 aaKnown RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 CXorf58Q96LI9 332 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 RNF2Q99496 336 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 RASL11BQ9BPW5 248 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 WDR61Q9GZS3 305 aaKnown RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 C11orf1Q9H5F2 150 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 SIRT7Q9NRC8 400 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 NDUFA4L2Q9NRX3 87 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 SLC39A9Q9NUM3 307 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 METTL1Q9UBP6 276 aaKnown RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 AUP1Q9Y679 476 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 ARHGAP21Q5T5U3 1957 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 TRAV30A0A087WSZ9 112 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TRAV1-1A0A0B4J248 108 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TEX50A0A1B0GTY4 177 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 UBE2L5PA0A1B0GUS4 154 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 NCBP2LA6PVI3 153 aaKnown RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 ODF3BA8MYP8 253 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 I3L521 148 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 NPFFO15130 113 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 NBR2O15453 112 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 NDUFS6O75380 124 aaKnown RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 FBP1P09467 338 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 HIST1H1BP16401 226 aaKnown RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 M6PRP20645 277 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 OPRK1P41145 380 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 VDAC2P45880 294 aaPredicted RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TAS2R45P59539 299 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 PAX8Q06710 450 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 PSG5Q15238 335 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 MMDQ15546 238 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 SSX2Q16385 188 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TNXAQ16473 311 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 AANATQ16613 207 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 VWC2Q2TAL6 325 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 BTNL8Q6UX41 500 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 ZNF562Q6V9R5 426 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 VKORC1L1Q8N0U8 176 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 SVBPQ8N300 66 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 Q8N7P7 452 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 NPBQ8NG41 125 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 OR1L4Q8NGR5 311 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 SFT2D1Q8WV19 159 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 OR4C12Q96R67 309 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TXNDC17Q9BRA2 123 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 MCRIP2Q9BUT9 160 aaKnown RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 EIF5A2Q9GZV4 153 aaKnown RBP3.49□□□□□ -1.85
CLDND1-228ENST00000513873 SIRPDQ9H106 197 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 TREM1Q9NP99 234 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 WDR83OSQ9Y284 106 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 SIGLEC9Q9Y336 463 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 HILPDAQ9Y5L2 63 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 FREM1Q5H8C1 2179 aa3.49□□□□□ -1.85
CLDND1-228ENST00000513873 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 IGHV1-69DA0A0B4J2H0 117 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 A0A1B0GW64 132 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 A0A1W2PPR1 153 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 MFSD2BA6NFX1 497 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 VENTXO95231 258 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM50AO95807 157 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 CA2P00918 260 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 IGKV1D-33P01593 117 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 IGKV1-33P01594 117 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 IGHV1-69P01742 117 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 OR13C7P0DN81 318 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 IGHV4-31P0DP07 118 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 ZP3P21754 424 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 RPL29P47914 159 aaKnown RBP3.48□□□□□ -1.85
CLDND1-228ENST00000513873 PSMB3P49720 205 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 RHOBP62745 196 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 LOXL1Q08397 574 aaPredicted RBP3.48□□□□□ -1.85
CLDND1-228ENST00000513873 EBI3Q14213 229 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 C5orf64Q2M2E5 130 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 FAM74A1Q5RGS3 127 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 ADAMTSL4-AS1Q5T5F5 129 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM144Q7Z5S9 345 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 THAP8Q8NA92 274 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 STXBP6Q8NFX7 210 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 OR10G4Q8NGN3 311 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 OR10G9Q8NGN4 311 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms