RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 C11orf1Q9H5F2 150 aa13.04□□□□□ -0.32
DDR1-272ENST00000513243 GPN1Q9HCN4 374 aaPredicted RBP13.04□□□□□ -0.32
DDR1-272ENST00000513243 KNCNA6PVL3 124 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 FNDC10F2Z333 226 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 ORM2P19652 201 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 PSMG4Q5JS54 123 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 ZFAND6Q6FIF0 208 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 CYP2G1PQ6ZSU1 146 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
DDR1-272ENST00000513243 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.33
DDR1-272ENST00000513243 STHQ8IWL8 128 aa13.02□□□□□ -0.33
DDR1-272ENST00000513243 SEPSECSQ9HD40 501 aaKnown RBP13.02□□□□□ -0.33
DDR1-272ENST00000513243 MGAT4CQ9UBM8 478 aa13.02□□□□□ -0.33
DDR1-272ENST00000513243 FBXL17Q9UF56 701 aa13.02□□□□□ -0.33
DDR1-272ENST00000513243 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.33
DDR1-272ENST00000513243 BCAP31P51572 246 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 DEFA1P59665 94 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 DEFA3P59666 94 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 SNRPD3P62318 126 aaKnown RBP13.01□□□□□ -0.33
DDR1-272ENST00000513243 RAB32Q13637 225 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
DDR1-272ENST00000513243 OR8I2Q8N0Y5 310 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 OR1B1Q8NGR6 318 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 MARVELD1Q9BSK0 173 aa13.01□□□□□ -0.33
DDR1-272ENST00000513243 FAM24AA6NFZ4 105 aa13□□□□□ -0.33
DDR1-272ENST00000513243 ZNF98A6NK75 572 aa13□□□□□ -0.33
DDR1-272ENST00000513243 PRAF2O60831 178 aa13□□□□□ -0.33
DDR1-272ENST00000513243 DEDDO75618 318 aa13□□□□□ -0.33
DDR1-272ENST00000513243 CAV2P51636 162 aa13□□□□□ -0.33
DDR1-272ENST00000513243 S100A10P60903 97 aa13□□□□□ -0.33
DDR1-272ENST00000513243 TEPPQ6URK8 271 aa13□□□□□ -0.33
DDR1-272ENST00000513243 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
DDR1-272ENST00000513243 GGACTQ9BVM4 153 aa13□□□□□ -0.33
DDR1-272ENST00000513243 DOK5Q9P104 306 aa13□□□□□ -0.33
DDR1-272ENST00000513243 CST7O76096 145 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 SIX6O95475 246 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 CA1P00915 261 aaPredicted RBP12.99□□□□□ -0.33
DDR1-272ENST00000513243 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
DDR1-272ENST00000513243 LINC00869P0C866 280 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 PVALBP20472 110 aaPredicted RBP12.99□□□□□ -0.33
DDR1-272ENST00000513243 SELENOTP62341 195 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 SLC38A11Q08AI6 406 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 SLC25A32Q9H2D1 315 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 SLC25A22Q9H936 323 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 AGRNO00468 2067 aa12.99□□□□□ -0.33
DDR1-272ENST00000513243 A0A0J9YWU9 116 aa12.98□□□□□ -0.33
DDR1-272ENST00000513243 SOCS3O14543 225 aa12.98□□□□□ -0.33
DDR1-272ENST00000513243 GOSR2O14653 212 aa12.98□□□□□ -0.33
DDR1-272ENST00000513243 PLP1P60201 277 aa12.98□□□□□ -0.33
DDR1-272ENST00000513243 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
DDR1-272ENST00000513243 SCRT1Q9BWW7 348 aa12.98□□□□□ -0.33
DDR1-272ENST00000513243 LYRM2Q9NU23 88 aaPredicted RBP12.98□□□□□ -0.33
DDR1-272ENST00000513243 KMT2CQ8NEZ4 4911 aaKnown RBP12.98□□□□□ -0.33
DDR1-272ENST00000513243 IGSF23A1L1A6 192 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 AGPAT2O15120 278 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 HYPMO75409 117 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 TMEM252Q8N6L7 170 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 TMEM217Q8N7C4 229 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 IL17DQ8TAD2 202 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 C17orf77Q96MU5 243 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 SHANK2-AS3Q9BTD1 123 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 SLC25A39Q9BZJ4 359 aaPredicted RBP12.97□□□□□ -0.33
DDR1-272ENST00000513243 HIGD1AQ9Y241 93 aa12.97□□□□□ -0.33
DDR1-272ENST00000513243 H3BRN7 92 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 OR5G3P0C626 314 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 SPP1P10451 314 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 S100A7P31151 101 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 ID1P41134 155 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 GALR1P47211 349 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 PSMB3P49720 205 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 DEFB1P60022 68 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 RAP2BP61225 183 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDR1-272ENST00000513243 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
DDR1-272ENST00000513243 PATE2Q6UY27 113 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 LINC00052Q96N35 136 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 UHRF2Q96PU4 802 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 MGST2Q99735 147 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 RARRES2Q99969 163 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 RSG1Q9BU20 258 aa12.96□□□□□ -0.33
DDR1-272ENST00000513243 H3BMM0 161 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 C4BPBP20851 252 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 SULT1A1P50225 295 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 ZNF546Q86UE3 836 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 OR11H2Q8NH07 326 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 GPR82Q96P67 336 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 NMES1Q9C002 83 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 ARL6Q9H0F7 186 aa12.95□□□□□ -0.34
DDR1-272ENST00000513243 ISLRO14498 428 aa12.94□□□□□ -0.34
DDR1-272ENST00000513243 H2BFSP57053 126 aa12.94□□□□□ -0.34
DDR1-272ENST00000513243 VWC2Q2TAL6 325 aa12.94□□□□□ -0.34
DDR1-272ENST00000513243 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
DDR1-272ENST00000513243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.94□□□□□ -0.34
DDR1-272ENST00000513243 UQCC1Q9NVA1 299 aa12.94□□□□□ -0.34
DDR1-272ENST00000513243 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
DDR1-272ENST00000513243 S100A11P31949 105 aa12.93□□□□□ -0.34
DDR1-272ENST00000513243 MEOX2P50222 304 aa12.93□□□□□ -0.34
DDR1-272ENST00000513243 LRRC37A5PQ49AS3 106 aa12.93□□□□□ -0.34
DDR1-272ENST00000513243 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms