RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 GATAD1Q8WUU5 269 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 TMED6Q8WW62 240 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 PHYHIPLQ96FC7 376 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 PFDN5Q99471 154 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 DNAJC4Q9NNZ3 241 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
PDPN-210ENST00000513143 DOK5Q9P104 306 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 RABAC1Q9UI14 185 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 TMEM213A2RRL7 107 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 COX7A2P2O60397 106 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 MBP02144 154 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 OR5G3P0C626 314 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 M6PRP20645 277 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 NPPCP23582 126 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 CRYBB3P26998 211 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 ACOT6Q3I5F7 207 aaPredicted RBP9.55□□□□□ -0.88
PDPN-210ENST00000513143 TM4SF20Q53R12 229 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 C10orf113Q5VZT2 155 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 LINC00482Q8N8I6 264 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 METTL26Q96S19 204 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 HIGD1AQ9Y241 93 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 U3KQE9 123 aa9.55□□□□□ -0.88
PDPN-210ENST00000513143 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 M0QZ24 198 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 OVOL1O14753 267 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 ZNF207O43670 478 aaKnown RBP9.54□□□□□ -0.88
PDPN-210ENST00000513143 RAB2AP61019 212 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 AKR1C8PQ5T2L2 129 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 S100A7AQ86SG5 101 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 RNF2Q99496 336 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 SLC25A39Q9BZJ4 359 aaPredicted RBP9.54□□□□□ -0.88
PDPN-210ENST00000513143 RPRMQ9NS64 109 aa9.54□□□□□ -0.88
PDPN-210ENST00000513143 IGHV7-4-1A0A0J9YVY3 117 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 C2orf70A6NJV1 201 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 S100A7P31151 101 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 TMEM41BQ5BJD5 291 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 IL34Q6ZMJ4 242 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 LINC00305Q7Z4B0 112 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 RPP25LQ8N5L8 163 aaKnown RBP9.53□□□□□ -0.88
PDPN-210ENST00000513143 OR10G4Q8NGN3 311 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 OR10G9Q8NGN4 311 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 OR10G7Q8NGN6 311 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 MARC2Q969Z3 335 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 UHRF2Q96PU4 802 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 SHANK2-AS3Q9BTD1 123 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
PDPN-210ENST00000513143 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
PDPN-210ENST00000513143 VWFP04275 2813 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 ZNF98A6NK75 572 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 SEC14L6B5MCN3 397 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 H3BRN7 92 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 BUB3O43684 328 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 APOHP02749 345 aaPredicted RBP9.52□□□□□ -0.89
PDPN-210ENST00000513143 CSN3P07498 182 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 EDN2P20800 178 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 CBLN1P23435 193 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 SULT1A2P50226 295 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 RAB5CP51148 216 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 RHOBP62745 196 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 FAM78BQ5VT40 261 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 ALKAL2Q6UX46 152 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 ADAMTSL5Q6ZMM2 481 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 NARS2Q96I59 477 aaKnown RBP9.52□□□□□ -0.89
PDPN-210ENST00000513143 MRPL32Q9BYC8 188 aaKnown RBP9.52□□□□□ -0.89
PDPN-210ENST00000513143 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
PDPN-210ENST00000513143 IGHV3-49A0A0A0MS15 119 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 A0A1W2PS18 150 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 CHEK1O14757 476 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 FOLR2P14207 255 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 MORN5Q5VZ52 161 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 FAM122CQ6P4D5 195 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 DPPA3Q6W0C5 159 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 ZNF680Q8NEM1 530 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 WFDC9Q8NEX5 89 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 ELOVL1Q9BW60 279 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 RHPN1-AS1Q9BWJ2 59 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 TECRQ9NZ01 308 aaKnown RBP9.51□□□□□ -0.89
PDPN-210ENST00000513143 RNF24Q9Y225 148 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 FUT9Q9Y231 359 aa9.51□□□□□ -0.89
PDPN-210ENST00000513143 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 BMI1P35226 326 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 CDC34P49427 236 aaPredicted RBP9.5□□□□□ -0.89
PDPN-210ENST00000513143 FAM74A1Q5RGS3 127 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 C1orf194Q5T5A4 169 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 SPATA31B1PQ5VZV4 182 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 LEMD1Q68G75 181 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 C16orf54Q6UWD8 224 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 MIR17HGQ75NE6 70 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 SPATA3Q8NHX4 192 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms