RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, human

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFC1-215	ENST00000512881	SULT1A4	P0DMN0	295 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	DHRS2	Q13268	280 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	RAB32	Q13637	225 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	NMS	Q5H8A3	153 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	ETFRF1	Q6IPR1	90 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	C16orf54	Q6UWD8	224 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	LYZL2	Q7Z4W2	148 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	TRPT1	Q86TN4	253 aa	Known RBP	4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	NOXA1	Q86UR1	476 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	SLC24A4	Q8NFF2	622 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	DCANP1	Q8TF63	244 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	NPIPB3	Q92617	1050 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	IL22RA2	Q969J5	263 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	SCGB3A2	Q96PL1	93 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	SOST	Q9BQB4	213 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	BCL7B	Q9BQE9	202 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	MFF	Q9GZY8	342 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	C11orf68	Q9H3H3	251 aa	Known RBP	4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	MCUB	Q9NWR8	336 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	FBXL17	Q9UF56	701 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	SCP2D1	Q9UJQ7	156 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881		U3KQ87	197 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881	HERC2	O95714	4834 aa		4.99	□□□□□ -1.61
RFC1-215	ENST00000512881		A0A0B4J2A0	478 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	FABP12	A6NFH5	140 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	IFNA10	P01566	189 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	IL4	P05112	153 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	AKR1C4	P17516	323 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	NPY1R	P25929	384 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	TNFSF8	P32971	234 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	EIF2B2	P49770	351 aa	Known RBP	4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	CCR6	P51684	374 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	AP2S1	P53680	142 aa	Predicted RBP	4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	SUPT4H1	P63272	117 aa	Known RBP	4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	TMEM41B	Q5BJD5	291 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	ACTL10	Q5JWF8	245 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	LGALS9C	Q6DKI2	356 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	MORN3	Q6PF18	240 aa	Predicted RBP	4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	LGI3	Q8N145	548 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	GLMP	Q8WWB7	406 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	ACY3	Q96HD9	319 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	RAB40C	Q96S21	281 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	SLIRP	Q9GZT3	109 aa	Known RBP	4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	HSPB7	Q9UBY9	170 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	SHPK	Q9UHJ6	478 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	FAT2	Q9NYQ8	4349 aa		4.98	□□□□□ -1.61
RFC1-215	ENST00000512881	hCG_2014768	A0A024R1R8	64 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	IGHV4-28	A0A0C4DH34	117 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881		H3BMQ9	156 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	BUB3	O43684	328 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	TOMM40	O96008	361 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	RBMY1A1	P0DJD3	496 aa	Known RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	RBMY1C	P0DJD4	496 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	SPP1	P10451	314 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	PSG1	P11464	419 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	ANXA3	P12429	323 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	GPX4	P36969	197 aa	Predicted RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	ATP5I	P56385	69 aa	Predicted RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	SUMO2	P61956	95 aa	Known RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	SMCO1	Q147U7	214 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	RBMY1F	Q15415	496 aa	Known RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	USF2	Q15853	346 aa	Predicted RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	PSMG4	Q5JS54	123 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	RPP25L	Q8N5L8	163 aa	Known RBP	4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	NRAC	Q8N912	160 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881		Q8NAQ8	132 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	OR51G1	Q8NGK1	321 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	PRSS3P2	Q8NHM4	247 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	MCFD2	Q8NI22	146 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	DTD1	Q8TEA8	209 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	C2CD4C	Q8TF44	421 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	RBKS	Q9H477	322 aa		4.97	□□□□□ -1.61
RFC1-215	ENST00000512881	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	FAM90A26	D6RGX4	464 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	NOL3	O60936	208 aa	Known RBP	4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	DEDD	O75618	318 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	MIF	P14174	115 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	C4BPB	P20851	252 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	SNRPD3	P62318	126 aa	Known RBP	4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	SRPX	P78539	464 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	GAMT	Q14353	236 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	PYDC2	Q56P42	97 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	PXDC1	Q5TGL8	231 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	SIGLEC15	Q6ZMC9	328 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	CSNK1G2-AS1	Q8NCQ2	148 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	OR1S1	Q8NH92	325 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	HRH4	Q9H3N8	390 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	SEPSECS	Q9HD40	501 aa	Known RBP	4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	NRN1	Q9NPD7	142 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	CLEC5A	Q9NY25	188 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	TBC1D24	Q9ULP9	559 aa		4.96	□□□□□ -1.62
RFC1-215	ENST00000512881	IGKV1D-37	A0A075B6S9	117 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	PIGBOS1	A0A0B4J2F0	54 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	ZFP92	A6NM28	416 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	IGLL5	B9A064	214 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	C11orf94	C9JXX5	98 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881		H3BMM0	161 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	PITX3	O75364	302 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	HLA-DMB	P28068	263 aa		4.95	□□□□□ -1.62
RFC1-215	ENST00000512881	FAU	P35544	74 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms