RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 EFNA4P52798 201 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 EXOC3-AS1Q8N2X6 119 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 INTS1Q8N201 2190 aaKnown RBP10.22□□□□□ -0.77
COL11A1-210ENST00000512756 CD28P10747 220 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 DSCR9P59020 149 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 BMPERQ8N8U9 685 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 GAFA1Q96PS6 74 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 SIP14410 1827 aa10.22□□□□□ -0.77
COL11A1-210ENST00000512756 TRAV8-2A0A0B4J237 113 aa10.21□□□□□ -0.77
COL11A1-210ENST00000512756 M0R1W7 72 aa10.21□□□□□ -0.77
COL11A1-210ENST00000512756 IGHG3P01860 377 aa10.21□□□□□ -0.77
COL11A1-210ENST00000512756 C9orf139Q6ZV77 190 aa10.21□□□□□ -0.77
COL11A1-210ENST00000512756 RPRMLQ8N4K4 120 aa10.21□□□□□ -0.77
COL11A1-210ENST00000512756 MEGF9Q9H1U4 602 aa10.21□□□□□ -0.77
COL11A1-210ENST00000512756 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.78
COL11A1-210ENST00000512756 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.78
COL11A1-210ENST00000512756 ZNF138P52744 262 aa10.21□□□□□ -0.78
COL11A1-210ENST00000512756 C5orf64Q2M2E5 130 aa10.21□□□□□ -0.78
COL11A1-210ENST00000512756 D6R8Y8 96 aa10.21□□□□□ -0.78
COL11A1-210ENST00000512756 LYZL1Q6UWQ5 148 aa10.21□□□□□ -0.78
COL11A1-210ENST00000512756 VMO1Q7Z5L0 202 aa10.21□□□□□ -0.78
COL11A1-210ENST00000512756 DPH3Q96FX2 82 aa10.21□□□□□ -0.78
COL11A1-210ENST00000512756 PAX2Q02962 417 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 MRPL52Q86TS9 123 aaKnown RBP10.2□□□□□ -0.78
COL11A1-210ENST00000512756 NUP35Q8NFH5 326 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
COL11A1-210ENST00000512756 IGKV1D-17A0A075B6S4 117 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 TRAV40A0A0B4J280 105 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 LILRA1O75019 489 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
COL11A1-210ENST00000512756 RFNGQ9Y644 331 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 FAM90A2PQ658T7 463 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 SIGLEC9Q9Y336 463 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 TRBV7-1A0A0A6YYK4 115 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 ETV2O00321 342 aaPredicted RBP10.2□□□□□ -0.78
COL11A1-210ENST00000512756 TMEM256Q8N2U0 113 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 KIR3DL3Q8N743 410 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 TRAV2A0A0B4J234 112 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 A0A0G2JRQ6 117 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 SAMD5Q5TGI4 173 aa10.2□□□□□ -0.78
COL11A1-210ENST00000512756 PSG3Q16557 428 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 LINC00477Q96M19 166 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 BUB1B-PAK6H3BSN5 160 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 RNASE2P10153 161 aaKnown RBP10.19□□□□□ -0.78
COL11A1-210ENST00000512756 RPL15P61313 204 aaKnown RBP10.19□□□□□ -0.78
COL11A1-210ENST00000512756 PYY3Q5JQD4 70 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 Q6ZRM9 215 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 A8MWV9 139 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 TOMM40O96008 361 aa10.19□□□□□ -0.78
COL11A1-210ENST00000512756 SLC25A20O43772 301 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 MORN3Q6PF18 240 aaPredicted RBP10.18□□□□□ -0.78
COL11A1-210ENST00000512756 ANAPC10Q9UM13 185 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 TP53BP1Q12888 1972 aaPredicted RBP10.18□□□□□ -0.78
COL11A1-210ENST00000512756 MED12Q93074 2177 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 A0A1W2PRX2 142 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 TMEM238C9JI98 176 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 ADCYAP1P18509 176 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 MALP21145 153 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 CD300EQ496F6 205 aaPredicted RBP10.18□□□□□ -0.78
COL11A1-210ENST00000512756 C5orf24Q7Z6I8 188 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 ZNF581Q9P0T4 197 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 EP300Q09472 2414 aaPredicted RBP10.18□□□□□ -0.78
COL11A1-210ENST00000512756 SCN5AQ14524 2016 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
COL11A1-210ENST00000512756 SPTBN1Q01082 2364 aaKnown RBP10.18□□□□□ -0.78
COL11A1-210ENST00000512756 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
COL11A1-210ENST00000512756 SH2D1AO60880 128 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 GAGE13Q4V321 117 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 DPH3P1Q9H4G8 78 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 CRIM1Q9NZV1 1036 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 ERG28Q9UKR5 140 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 NCR2O95944 276 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 C20orf204Q6ZNR8 217 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 GFRA4Q9GZZ7 299 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 MPDZO75970 2070 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 TMEM8BA6NDV4 472 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 IGHV4-39P01824 125 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 MST1LQ2TV78 715 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 CD33P20138 364 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 ZNF124Q15973 351 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 LHFPL4Q7Z7J7 247 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 SIGMAR1Q99720 223 aa10.17□□□□□ -0.78
COL11A1-210ENST00000512756 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 TMEM95Q3KNT9 176 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 PDE6HQ13956 83 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 LCN12Q6JVE5 192 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 VCYO14598 125 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 LMO1P25800 156 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 GUSBP1Q15486 140 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 ARTNQ5T4W7 220 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 Q6ZS92 163 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 ZNF329Q86UD4 541 aa10.16□□□□□ -0.78
COL11A1-210ENST00000512756 TMEM86BQ8N661 226 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms