RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 AMTNQ6UX39 209 aa8.69□□□□□ -1.02
DDX41-215ENST00000512431 Q6ZSN1 163 aa8.69□□□□□ -1.02
DDX41-215ENST00000512431 FAM219AQ8IW50 185 aa8.69□□□□□ -1.02
DDX41-215ENST00000512431 RXFP4Q8TDU9 374 aa8.69□□□□□ -1.02
DDX41-215ENST00000512431 LINC01587Q99440 93 aa8.69□□□□□ -1.02
DDX41-215ENST00000512431 MRPS16Q9Y3D3 137 aaKnown RBP8.69□□□□□ -1.02
DDX41-215ENST00000512431 ZFP92A6NM28 416 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 NXPH3O95157 252 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 FABP1P07148 127 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 HTN1P15515 57 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 ZNF182P17025 639 aaPredicted RBP8.68□□□□□ -1.02
DDX41-215ENST00000512431 PI3P19957 117 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX41-215ENST00000512431 CNN1P51911 297 aaKnown RBP8.68□□□□□ -1.02
DDX41-215ENST00000512431 LYZP61626 148 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 KLF9Q13886 244 aaPredicted RBP8.68□□□□□ -1.02
DDX41-215ENST00000512431 CROCCP3Q8IVE0 287 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 C16orf74Q96GX8 76 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 COPZ2Q9P299 210 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 FAT1Q14517 4588 aa8.68□□□□□ -1.02
DDX41-215ENST00000512431 A0A0G2JRQ6 117 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 A0A0J9YY99 117 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 PLAC8L1A1L4L8 177 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 SNRPGP15A8MWD9 76 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
DDX41-215ENST00000512431 GALR1P47211 349 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 GABARAPL2P60520 117 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 SP6Q3SY56 376 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 TMEM144Q7Z5S9 345 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 SAMD12Q8N8I0 201 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 CCDC71LQ8N9Z2 235 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 OR11H7Q8NGC8 314 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 PPP1R14DQ9NXH3 145 aa8.67□□□□□ -1.02
DDX41-215ENST00000512431 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 SMIM31A0A1B0GVY4 71 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 GABARAPH6UMI1 98 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 B3GALNT1O75752 331 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 GABARAPO95166 117 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 TAS2R60P59551 318 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 KRTAP10-1P60331 282 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 AARDQ4LEZ3 155 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
DDX41-215ENST00000512431 BAP18Q8IXM2 172 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 GPX8Q8TED1 209 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 NOP10Q9NPE3 64 aaKnown RBP8.66□□□□□ -1.02
DDX41-215ENST00000512431 CACFD1Q9UGQ2 172 aa8.66□□□□□ -1.02
DDX41-215ENST00000512431 H3BNG1 76 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 ELK1P19419 428 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 UCP1P25874 307 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 ZNF90Q03938 601 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 ARRDC1Q8N5I2 433 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 ZFAND1Q8TCF1 268 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 RSG1Q9BU20 258 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 Q9H521 79 aa8.65□□□□□ -1.02
DDX41-215ENST00000512431 BOLA2-SMG1P6H3BVE0 249 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 ZNF701M0R085 212 aaPredicted RBP8.64□□□□□ -1.03
DDX41-215ENST00000512431 SIVA1O15304 175 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 GCSHP23434 173 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 RHOBP62745 196 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 GAMTQ14353 236 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 NMSQ5H8A3 153 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 TMEM170AQ8WVE7 144 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 SLC35E1Q96K37 410 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 SLC25A22Q9H936 323 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 CACNG5Q9UF02 275 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 U3KQ87 197 aa8.64□□□□□ -1.03
DDX41-215ENST00000512431 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
DDX41-215ENST00000512431 UBR4Q5T4S7 5183 aa8.63□□□□□ -1.03
DDX41-215ENST00000512431 S100A7P31151 101 aa8.63□□□□□ -1.03
DDX41-215ENST00000512431 OR2F1Q13607 317 aa8.63□□□□□ -1.03
DDX41-215ENST00000512431 RNASE10Q5GAN6 216 aaKnown RBP8.63□□□□□ -1.03
DDX41-215ENST00000512431 SNX29P2Q8IUI4 249 aa8.63□□□□□ -1.03
DDX41-215ENST00000512431 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
DDX41-215ENST00000512431 SLC25A39Q9BZJ4 359 aaPredicted RBP8.63□□□□□ -1.03
DDX41-215ENST00000512431 VPS13BQ7Z7G8 4022 aa8.63□□□□□ -1.03
DDX41-215ENST00000512431 CDS2O95674 445 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 CFDP00746 253 aaPredicted RBP8.62□□□□□ -1.03
DDX41-215ENST00000512431 RLN2P04090 185 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 GPX4P36969 197 aaPredicted RBP8.62□□□□□ -1.03
DDX41-215ENST00000512431 FGL1Q08830 312 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 LHFPL1Q86WI0 220 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 CCDC28AQ8IWP9 274 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 LGI3Q8N145 548 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 ZNF738Q8NE65 137 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 OR1B1Q8NGR6 318 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 RBPMSQ93062 196 aaKnown RBP8.62□□□□□ -1.03
DDX41-215ENST00000512431 GPR82Q96P67 336 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 TMEM222Q9H0R3 208 aa8.62□□□□□ -1.03
DDX41-215ENST00000512431 FLG2Q5D862 2391 aaPredicted RBP8.61□□□□□ -1.03
DDX41-215ENST00000512431 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
DDX41-215ENST00000512431 A0A087WTM6 91 aa8.61□□□□□ -1.03
DDX41-215ENST00000512431 GAGE12BA1L429 117 aa8.61□□□□□ -1.03
DDX41-215ENST00000512431 ZNF98A6NK75 572 aa8.61□□□□□ -1.03
DDX41-215ENST00000512431 GAGE7O76087 117 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms