RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 DERL1Q9BUN8 251 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 ZFP30Q9Y2G7 519 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 COLCA2A8K830 154 aa10.58□□□□□ -0.71
PCDHA4-202ENST00000512229 NDUFS7O75251 213 aa10.58□□□□□ -0.71
PCDHA4-202ENST00000512229 POU2AF1Q16633 256 aa10.58□□□□□ -0.71
PCDHA4-202ENST00000512229 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 SRRM4A7MD48 611 aaKnown RBP10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 CNTFRP26992 372 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 PKIAP61925 76 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 MSMPQ1L6U9 139 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 DUX5Q96PT3 197 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 ADCYAP1P18509 176 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 GUSBP1Q15486 140 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 LINC00518Q8N0U6 118 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 MYO9AB2RTY4 2548 aa10.58□□□□□ -0.72
PCDHA4-202ENST00000512229 LRP4O75096 1905 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 FABP5P3A8MUU1 101 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 MSMBP08118 114 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 IZUMO1RA6ND01 250 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 C22orf46C9J442 243 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 Q6AWC8 147 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 TMEM136Q6ZRR5 245 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 MAP1LC3AQ9H492 121 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 SOX21Q9Y651 276 aaPredicted RBP10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 HAPLN4Q86UW8 402 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
PCDHA4-202ENST00000512229 WT1-ASQ06250 92 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 IGHV2-70DA0A0C4DH43 119 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 MUC21A0A0G2JKD1 596 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 MUC21A0A140T8X8 626 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 C9JCJ5 164 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 VAMP3Q15836 100 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 FAM209BQ5JX69 171 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 MUC21Q5SSG8 566 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 BTF3P20290 206 aaKnown RBP10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 G0S2P27469 103 aa10.56□□□□□ -0.72
PCDHA4-202ENST00000512229 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 IGHV2-70P01814 119 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 HOXA5P20719 270 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 M0R143 59 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 SAMD13Q5VXD3 122 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 TCF23Q7RTU1 214 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 ASCL2Q99929 193 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 CXCL1P09341 107 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
PCDHA4-202ENST00000512229 TCAPO15273 167 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BKO60814 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 TCRAP04437 139 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BJP06899 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BOP23527 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BBP33778 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BDP58876 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BCP62807 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST2H2BEQ16778 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 FER1L6-AS1Q8NA97 138 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BHQ93079 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BNQ99877 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 HIST1H2BMQ99879 126 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 CHD9Q3L8U1 2897 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 M0R381 172 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 PMCHL1Q16048 86 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 TMEM170AQ8WVE7 144 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 GATA3P23771 443 aa10.54□□□□□ -0.72
PCDHA4-202ENST00000512229 VCANP13611 3396 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 TRBV20OR9-2A0A075B6H5 130 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 TRBV7-1A0A0A6YYK4 115 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 FOLR2P14207 255 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 FOXL1Q12952 345 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 DMRTC2Q8IXT2 367 aaPredicted RBP10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 C8orf31Q8N9H6 132 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 IGHV1-69DA0A0B4J2H0 117 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 TMEM97Q5BJF2 176 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 ZNF841Q6ZN19 808 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 SZT2Q5T011 3432 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 LOC105371267A0A1B0GV96 52 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 A0A1B0GW15 77 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 CRIP3Q6Q6R5 217 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 NUDT11Q96G61 164 aa10.53□□□□□ -0.72
PCDHA4-202ENST00000512229 TSKUQ8WUA8 353 aa10.52□□□□□ -0.72
PCDHA4-202ENST00000512229 IFITM10A6NMD0 228 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 TOMM40O96008 361 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms