RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SNAPINO95295 136 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 SRD5A1P18405 259 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 FCGR2BP31994 310 aaPredicted RBP6.31□□□□□ -1.4
HTT-209ENST00000512068 PLP1P60201 277 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 UBE2G2P60604 165 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 MEF2BQ02080 365 aaPredicted RBP6.31□□□□□ -1.4
HTT-209ENST00000512068 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 ICAM4Q14773 271 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 SPATA31B1PQ5VZV4 182 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 ZNF600Q6ZNG1 722 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 SUN5Q8TC36 379 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 ZNF418Q8TF45 676 aaPredicted RBP6.31□□□□□ -1.4
HTT-209ENST00000512068 RNF125Q96EQ8 232 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 NOL4LQ96MY1 436 aaPredicted RBP6.31□□□□□ -1.4
HTT-209ENST00000512068 ATP6V0BQ99437 205 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 PAXXQ9BUH6 204 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 TMPRSS5Q9H3S3 457 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 PRDM13Q9H4Q3 707 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 ZNF580Q9UK33 172 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 ARL2-SNX15V9GYD0 113 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 APCP25054 2843 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 CELSR2Q9HCU4 2923 aa6.31□□□□□ -1.4
HTT-209ENST00000512068 FASNP49327 2511 aaKnown RBP6.3□□□□□ -1.4
HTT-209ENST00000512068 M0R036 132 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 TGOLN2O43493 480 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
HTT-209ENST00000512068 ARL3P36405 182 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 CLEC19AQ6UXS0 136 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 ZNF502Q8TBZ5 544 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 TMEM37Q8WXS4 190 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 NIPSNAP3BQ9BS92 247 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 OR51M1Q9H341 326 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 TMEM160Q9NX00 188 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 CDC42EP3Q9UKI2 254 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 KLK9Q9UKQ9 250 aa6.3□□□□□ -1.4
HTT-209ENST00000512068 CARHSP1Q9Y2V2 147 aaKnown RBP6.3□□□□□ -1.4
HTT-209ENST00000512068 TMEM89A2RUT3 159 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 PSMB11A5LHX3 300 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 NDUFS6O75380 124 aaKnown RBP6.29□□□□□ -1.4
HTT-209ENST00000512068 OR2C1O95371 312 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 BRI3O95415 125 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 IGKV1-17P01599 117 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 CLEC3BP05452 202 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 OR10J4P0C629 311 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 RAB9AP51151 201 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 ZNF674Q2M3X9 581 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 TEX38Q6PEX7 206 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 BPIFA4PQ86YQ2 179 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 CYB561D1Q8N8Q1 229 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 OR4F17Q8NGA8 305 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 DUX5Q96PT3 197 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
HTT-209ENST00000512068 NKX6-2Q9C056 277 aaPredicted RBP6.29□□□□□ -1.4
HTT-209ENST00000512068 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
HTT-209ENST00000512068 PUS1Q9Y606 427 aaKnown RBP eCLIP6.29□□□□□ -1.4
HTT-209ENST00000512068 GCN1Q92616 2671 aaKnown RBP6.28□□□□□ -1.4
HTT-209ENST00000512068 TRAV5A0A0B4J249 113 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 WI2-2373I1.2A0A1W2PRP0 233 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 DNAJC9-AS1A6NH13 148 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 ZNF727A8MUV8 499 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
HTT-209ENST00000512068 CD99P14209 185 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 PPIFP30405 207 aaKnown RBP6.28□□□□□ -1.4
HTT-209ENST00000512068 KIAA0141Q14154 515 aaPredicted RBP6.28□□□□□ -1.4
HTT-209ENST00000512068 TMEM95Q3KNT9 176 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 C19orf54Q5BKX5 351 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 PATE2Q6UY27 113 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 ZNF491Q8N8L2 437 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 OR4X2Q8NGF9 303 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 BLNKQ8WV28 456 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 RPUSD4Q96CM3 377 aaKnown RBP6.28□□□□□ -1.4
HTT-209ENST00000512068 METTL26Q96S19 204 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 ITPR3Q14573 2671 aa6.28□□□□□ -1.4
HTT-209ENST00000512068 A0A1W2PRE2 83 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 C9JQL5 133 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 H3BRN7 92 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 IGHV3-11P01762 117 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 ELANEP08246 267 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 CTSGP08311 255 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 PYYP10082 97 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 RPL7P18124 248 aaKnown RBP6.27□□□□□ -1.41
HTT-209ENST00000512068 ADCYAP1P18509 176 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 ATP5G3P48201 142 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 LINC00310P59036 64 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 RPL15P61313 204 aaKnown RBP6.27□□□□□ -1.41
HTT-209ENST00000512068 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 PNRC1Q12796 327 aaPredicted RBP6.27□□□□□ -1.41
HTT-209ENST00000512068 FOXE3Q13461 319 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 C10orf91Q5T1B1 145 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 ZNF329Q86UD4 541 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 TMEM190Q8WZ59 177 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 TVP23CQ96ET8 276 aa6.27□□□□□ -1.41
HTT-209ENST00000512068 SMIM7Q9BQ49 75 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms