RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ZNF581Q9P0T4 197 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 FAM27E3Q08E93 113 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
CPNE4-209ENST00000512055 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 RNF126Q9BV68 326 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 H0YIZ8 118 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 B3GALT5-AS1P59052 145 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 GNG5P63218 68 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
CPNE4-209ENST00000512055 FAM201AQ5SY85 155 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
CPNE4-209ENST00000512055 TFF1P04155 84 aa9.02□□□□□ -0.96
CPNE4-209ENST00000512055 PLPPR1Q8TBJ4 325 aa9.02□□□□□ -0.96
CPNE4-209ENST00000512055 HEXA-AS1Q9H8Q6 139 aa9.02□□□□□ -0.96
CPNE4-209ENST00000512055 OR9G9P0C7N8 305 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 HEPN1Q6WQI6 88 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 INSP01308 110 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 LINC00305Q7Z4B0 112 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 COL4A3Q01955 1670 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 IGKV1D-13A0A0B4J2D9 117 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 PCNX2A6NKB5 2137 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 K7EP13 123 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 CCL21O00585 134 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 RS1O15537 224 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 IGKV1-13P0DP09 117 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 ACTL10Q5JWF8 245 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 DUX5Q96PT3 197 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 DCTN5Q9BTE1 182 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 MRPL32Q9BYC8 188 aaKnown RBP9.02□□□□□ -0.97
CPNE4-209ENST00000512055 REG1AP05451 166 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 PPDPFLQ8WWR9 84 aa9.02□□□□□ -0.97
CPNE4-209ENST00000512055 SRSF1Q07955 248 aaKnown RBP eCLIP9.01□□□□□ -0.97
CPNE4-209ENST00000512055 GATAD1Q8WUU5 269 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 TRAV13-1A0A0B4J241 112 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 C12orf77C9JDV5 145 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 SYNJ2BPP57105 145 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 CLDND2Q8NHS1 167 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 C19orf24Q9BVV8 132 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 CADP27708 2225 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 F8VVB4 439 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 F8VWA3 439 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 NBEAP1P0C6P0 100 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 QRFPP83859 136 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 HGFACQ04756 655 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 ZNF106Q9H2Y7 1883 aaKnown RBP9.01□□□□□ -0.97
CPNE4-209ENST00000512055 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
CPNE4-209ENST00000512055 CALYQ9NYX4 217 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 SOCS3O14543 225 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 C1QL4Q86Z23 238 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 PROK2Q9HC23 129 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 U3KQE9 123 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 FAM90A26D6RGX4 464 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 IL6RP08887 468 aaPredicted RBP9□□□□□ -0.97
CPNE4-209ENST00000512055 SNHG12Q9BXW3 62 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 IGHV2OR16-5A0A0B4J2B6 119 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 CXCL1P09341 107 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 CD28P10747 220 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 APOBEC3AP31941 199 aaPredicted RBP9□□□□□ -0.97
CPNE4-209ENST00000512055 UCNP55089 124 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 KLF17Q5JT82 389 aaPredicted RBP9□□□□□ -0.97
CPNE4-209ENST00000512055 Q6AWC8 147 aa9□□□□□ -0.97
CPNE4-209ENST00000512055 J3KT08 172 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 SUPT4H1P63272 117 aaKnown RBP8.99□□□□□ -0.97
CPNE4-209ENST00000512055 FOXF2Q12947 444 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 ACP7Q6ZNF0 438 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 PKIGQ9Y2B9 76 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 V9GYY9 64 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 COLCA2A8K830 154 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 J3QW42 95 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
CPNE4-209ENST00000512055 PEAR1Q5VY43 1037 aaPredicted RBP8.99□□□□□ -0.97
CPNE4-209ENST00000512055 SMIM8Q96KF7 97 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 CLEC7AQ9BXN2 247 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 CHCHD1Q96BP2 118 aaKnown RBP8.99□□□□□ -0.97
CPNE4-209ENST00000512055 SPANXCQ9NY87 97 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 LILRA1O75019 489 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 TMEM256Q8N2U0 113 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 C1QTNF4Q9BXJ3 329 aa8.99□□□□□ -0.97
CPNE4-209ENST00000512055 CRYBA4P53673 196 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 PRR31Q5SQ13 230 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 OR13A1Q8NGR1 328 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 SFXN3Q9BWM7 321 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 TCF19Q9Y242 345 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 F8WEM9 126 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 CIARTQ8N365 385 aaPredicted RBP8.98□□□□□ -0.97
CPNE4-209ENST00000512055 PCDH15Q96QU1 1955 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 A0A1W2PPI3 338 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 IL18BPO95998 194 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 IGFBP2P18065 325 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 MPZP25189 248 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 RPL39P5Q59GN2 51 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 LHFPL1Q86WI0 220 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms