RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 MDS2Q8NDY4 140 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PTPMT1Q8WUK0 201 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM190Q8WZ59 177 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SCAMP4Q969E2 229 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TBX15Q96SF7 602 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 LINC01587Q99440 93 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PCGF1Q9BSM1 259 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TM2D2Q9BX73 214 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRPL20Q9BYC9 149 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 UBL5Q9BZL1 73 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ESM1Q9NQ30 184 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 BEX4Q9NWD9 120 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1W2PNV4 684 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 EPM2AB3EWF7 344 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TIMM23O14925 209 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SYNGR3O43761 229 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CA1P00915 261 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 EVI2AP22794 236 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CRYGSP22914 178 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CKS2P33552 79 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 FUSP35637 526 aaKnown RBP eCLIP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 IFI27P40305 119 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 WNT4P56705 351 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CLDN18P56856 261 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SNRPEP62304 92 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 RPL8P62917 257 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCL20P78556 96 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TAL2Q16559 108 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ECSCRQ19T08 205 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 GCSAMLQ5JQS6 135 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR10J3Q5JRS4 329 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TSPO2Q5TGU0 170 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SDHAF4Q5VUM1 108 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF787Q6DD87 383 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 UNQ5815/PRO19632Q6UWF5 114 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 DCXRQ7Z4W1 244 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC35E3Q7Z769 313 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 LINC00346Q8IVM7 164 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZIC4Q8N9L1 334 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 WFDC11Q8NEX6 87 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC37A2Q8TED4 501 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CYB5D2Q8WUJ1 264 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ASB13Q8WXK3 278 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MISP3Q96FF7 219 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ARHGAP5-AS1Q96IT6 56 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 AMELXQ99217 191 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SDF2Q99470 211 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 HIST1H4GQ99525 98 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 RBKSQ9H477 322 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SMOC1Q9H4F8 434 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MSL2Q9HCI7 577 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TAS2R4Q9NYW5 299 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD84Q9UIB8 345 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1B0GUS0 222 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 NPIPB13A6NJU9 1138 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 H7C2G1 150 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRYO14603 147 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SCAMP2O15127 329 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 LYRM1O43325 122 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 C1orf105O95561 183 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CSN3P07498 182 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MPLP40238 635 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 HBBP68871 147 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 DGCR2P98153 550 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PMP22Q01453 160 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRDX1Q06830 199 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PSG7Q13046 419 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 IL13RA2Q14627 380 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PMCHL1Q16048 86 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CYB5R2Q6BCY4 276 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 C20orf204Q6ZNR8 217 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 DEFB119Q8N690 84 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 C15orf53Q8NAA6 179 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC16A11Q8NCK7 471 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPTSSBQ8NFR3 76 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR4P4Q8NGL7 312 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR52N5Q8NH56 324 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 SVIPQ8NHG7 77 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ISOC2Q96AB3 205 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CHAC1Q9BUX1 264 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 C5orf66Q9H5L9 145 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MMP25Q9NPA2 562 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TAAR3PQ9P1P4 343 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 KLK13Q9UKR3 277 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PLAGL1Q9UM63 463 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 KLK5Q9Y337 293 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 PPIAL4EA0A075B759 164 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV3D-15A0A087WSY6 115 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 C5orf49A4QMS7 147 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 C9JCJ5 164 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PPIAL4DF5H284 164 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 F8W735 103 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 J3QL48 77 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ARPC1BO15143 372 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPRY3O43610 288 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TNFSF13O75888 250 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV3-15P01624 115 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD55P08174 381 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRPL3P09001 348 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms