RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PLXNA4Q9HCM2 1894 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 TCF20Q9UGU0 1960 aaKnown RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 SDK2Q58EX2 2172 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 ABCA7Q8IZY2 2146 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 ARFGEF3Q5TH69 2177 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 IGLV3-12A0A075B6K2 115 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 M0R1W7 72 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 DANCRP0C864 163 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 ESDP10768 282 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 ATP5G3P48201 142 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 SSBP2P81877 361 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 CFHR3Q02985 330 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 ZNF474Q6S9Z5 364 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 ATP5L2Q7Z4Y8 100 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 OR10W1Q8NGF6 305 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 PLEKHB2Q96CS7 222 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 MLNRO43193 412 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 AMBPP02760 352 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 FOXF2Q12947 444 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 KLF5Q13887 457 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 FAM90A2PQ658T7 463 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 PLPPR1Q8TBJ4 325 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 SLC25A39Q9BZJ4 359 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 LSM4Q9Y4Z0 139 aaKnown RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 LINC01619G3V211 115 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 C17orf82Q86X59 251 aaPredicted RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 IMMP2LQ96T52 175 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 RHPN1-AS1Q9BWJ2 59 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 CNOT1A5YKK6 2376 aaKnown RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 IGKV2-40A0A087WW87 121 aaPredicted RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 IGKV2D-40P01614 121 aaPredicted RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 IGHV1-8P0DP01 117 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 PYYP10082 97 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 PRIMA1Q86XR5 153 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 LINC00477Q96M19 166 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 OVOL2Q9BRP0 275 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 COL6A6A6NMZ7 2263 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 IGHV1-3A0A0C4DH29 117 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 ERVH48-1M5A8F1 160 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 ZNF250P15622 560 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 CXCL2P19875 107 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 MST1LQ2TV78 715 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 GTF3AQ92664 365 aaKnown RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 MPTX1A8MV57 137 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 NDUFS5O43920 106 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 IGKCP01834 107 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 ZNF138P52744 262 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 TAL2Q16559 108 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 VWC2Q2TAL6 325 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 C5orf30Q96GV9 206 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 GGTLC1Q9BX51 225 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 COL4A6Q14031 1691 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 NCOR1O75376 2440 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 CACNA1EQ15878 2313 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 A0A0G2JNJ9 132 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 TMEM178BH3BS89 294 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 VCYO14598 125 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 TFF1P04155 84 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 Q0VFX4 171 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 LAGE3Q14657 143 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 Q9UFV3 132 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 NUP210Q8TEM1 1887 aaPredicted RBP4.76□□□□□ -1.65
USP38-203ENST00000511739 DOCK10Q96BY6 2186 aa4.76□□□□□ -1.65
USP38-203ENST00000511739 SCN2AQ99250 2005 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 PQLC2LA1A4F0 135 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 CTAG1AP78358 180 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 FAM19A2Q8N3H0 131 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 ZNF837Q96EG3 531 aaPredicted RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 WBP1Q96G27 269 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 SMIM2Q9BVW6 85 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 TM2D1Q9BX74 207 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 RPUSD1Q9UJJ7 312 aaKnown RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE12JA6NER3 117 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 OVOL3O00110 214 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 LYPD3O95274 346 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE1Q13065 139 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE4Q13068 117 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE5Q13069 117 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 C5orf64Q2M2E5 130 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE13Q4V321 117 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE2EQ4V326 116 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 TMEM200BQ69YZ2 307 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 SSBP4Q9BWG4 385 aaPredicted RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 DAZ1Q9NQZ3 744 aaKnown RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 GAGE2DQ9UEU5 116 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 PKIGQ9Y2B9 76 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 MYMXA0A1B0GTQ4 84 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 PMS2P5A8MQ11 134 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 A8MWV9 139 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 F8VVB4 439 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 F8VWA3 439 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 PRB4P10163 310 aaPredicted RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 ZFP36L1Q07352 338 aaKnown RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 RNF5Q99942 180 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 PRDM13Q9H4Q3 707 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms