RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
COL1A1-213ENST00000511732 GATA2P23769 480 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-213ENST00000511732 TCTAP57738 103 aa11.01□□□□□ -0.65
COL1A1-213ENST00000511732 FXYD7P58549 80 aa11.01□□□□□ -0.65
COL1A1-213ENST00000511732 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
COL1A1-213ENST00000511732 C12orf74Q32Q52 190 aa11.01□□□□□ -0.65
COL1A1-213ENST00000511732 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
COL1A1-213ENST00000511732 CIB3Q96Q77 187 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-213ENST00000511732 C1QTNF4Q9BXJ3 329 aa11.01□□□□□ -0.65
COL1A1-213ENST00000511732 TRAV10A0A0B4J240 114 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 C9orf170A2RU37 121 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 F6UB75 175 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 H3BP45 60 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 FABP1P07148 127 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 PSMB3P49720 205 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF705AQ6ZN79 300 aaPredicted RBP11□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF709Q8N972 641 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
COL1A1-213ENST00000511732 SCRT1Q9BWW7 348 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 SLC25A32Q9H2D1 315 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 PFDN2Q9UHV9 154 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 FLVCR2Q9UPI3 526 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 DNAH6Q9C0G6 4158 aa11□□□□□ -0.65
COL1A1-213ENST00000511732 ID1P41134 155 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 POLR2GP62487 172 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL1A1-213ENST00000511732 ID3Q02535 119 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 SPANXN2Q5MJ10 180 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 OR8I2Q8N0Y5 310 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 PPP1R14BQ96C90 147 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 C20orf173Q96LM9 149 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 SLC35B3Q9H1N7 401 aa10.99□□□□□ -0.65
COL1A1-213ENST00000511732 IGHV4-4A0A075B6R2 117 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF98A6NK75 572 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 PMS2P5A8MQ11 134 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF705FA8MVS1 300 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF701M0R085 212 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-213ENST00000511732 NDUFB6O95139 128 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF705DP0CH99 300 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-213ENST00000511732 ZNF705BP0CI00 300 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-213ENST00000511732 UBE2MP61081 183 aaKnown RBP10.98□□□□□ -0.65
COL1A1-213ENST00000511732 RPP30P78346 268 aaKnown RBP10.98□□□□□ -0.65
COL1A1-213ENST00000511732 ACOT7LQ6ZUV0 252 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 OR4B1Q8NGF8 309 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 COQ8AQ8NI60 647 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 NEU1Q99519 415 aa10.98□□□□□ -0.65
COL1A1-213ENST00000511732 LINC00854A0A1B0GVQ3 168 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 ISLRO14498 428 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 ORM2P19652 201 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 BTCP35070 178 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 PAX9P55771 341 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 OR4D5Q8NGN0 318 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 SLC25A22Q9H936 323 aa10.97□□□□□ -0.65
COL1A1-213ENST00000511732 STRAPQ9Y3F4 350 aaKnown RBP10.97□□□□□ -0.65
COL1A1-213ENST00000511732 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 DEFB131BA0A096LNP1 70 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 A0A0J9YX75 114 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 CCNKO75909 580 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 CFDP00746 253 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-213ENST00000511732 OR4E1P0C645 316 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 AKR1C1Q04828 323 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 FAM78BQ5VT40 261 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 TRIQKQ629K1 86 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 BPIFCQ8NFQ6 507 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 C16orf92Q96LL3 132 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 SLC45A2Q9UMX9 530 aa10.96□□□□□ -0.65
COL1A1-213ENST00000511732 ANXA7P20073 488 aaKnown RBP10.95□□□□□ -0.66
COL1A1-213ENST00000511732 INPP1P49441 399 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 TMEM144Q7Z5S9 345 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 C1orf158Q8N1D5 194 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 OR1B1Q8NGR6 318 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 PSENENQ9NZ42 101 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 DNAH2Q9P225 4427 aa10.95□□□□□ -0.66
COL1A1-213ENST00000511732 SSSCA1O60232 199 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 AMBPP02760 352 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 GALR1P47211 349 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 EMP1P54849 157 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 PSG9Q00887 426 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 IGFL4Q6B9Z1 124 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 CYP2G1PQ6ZSU1 146 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 RPRMQ9NS64 109 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 DOK5Q9P104 306 aa10.94□□□□□ -0.66
COL1A1-213ENST00000511732 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 SMCO3A2RU48 225 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 SMIM9A6NGZ8 99 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 A8MTW9 85 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 H3BRN7 92 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 MEOX2P50222 304 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 TMEM14EPQ6UXP3 125 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 SMIM8Q96KF7 97 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms