RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 C22orf39Q6P5X5 142 aa0.81□□□□□ -2.28
CHD1-207ENST00000511628 FAM19A2Q8N3H0 131 aa0.81□□□□□ -2.28
CHD1-207ENST00000511628 ACER3Q9NUN7 267 aa0.81□□□□□ -2.28
CHD1-207ENST00000511628 PCTPQ9UKL6 214 aa0.81□□□□□ -2.28
CHD1-207ENST00000511628 CHCHD2Q9Y6H1 151 aaPredicted RBP0.81□□□□□ -2.28
CHD1-207ENST00000511628 CCDC160A6NGH7 325 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 ZNF736B4DX44 427 aaPredicted RBP0.8□□□□□ -2.28
CHD1-207ENST00000511628 BANF1O75531 89 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 ATG12O94817 140 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 IL9P15248 144 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 PPP1R2P41236 205 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 ROMO1P60602 79 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 PPP1R2P3Q6NXS1 205 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 TEX261Q6UWH6 196 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 Q8N814 137 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 OR2T35Q8NGX2 323 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 OR10K1Q8NGX5 313 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 AP3S1Q92572 193 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 C14orf132Q9NPU4 83 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 CDC42SE1Q9NRR8 79 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 PYCARDQ9ULZ3 195 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 U3KQ87 197 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 NUP210LQ5VU65 1888 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 PLXNA4Q9HCM2 1894 aa0.8□□□□□ -2.28
CHD1-207ENST00000511628 MYO5AQ9Y4I1 1855 aaKnown RBP0.8□□□□□ -2.28
CHD1-207ENST00000511628 IGKV2D-26A0A0A0MRZ7 120 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 TRGV10A0A0A0MS01 117 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 TMEM238C9JI98 176 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 MFSD11O43934 449 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 PIAS1O75925 651 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 DHFRP00374 187 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 CRHP06850 196 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 DYNLT3P51808 116 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 UBE2BP63146 152 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 SNCBQ16143 134 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 SPRNQ5BIV9 151 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 BCL2L15Q5TBC7 163 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 LYG2Q86SG7 212 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 SMIM20Q8N5G0 67 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 TEX47Q8TBZ9 253 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 HOPXQ9BPY8 73 aaPredicted RBP0.79□□□□□ -2.28
CHD1-207ENST00000511628 PAIP2Q9BPZ3 127 aaKnown RBP0.79□□□□□ -2.28
CHD1-207ENST00000511628 SLC25A21Q9BQT8 299 aaPredicted RBP0.79□□□□□ -2.28
CHD1-207ENST00000511628 GINS3Q9BRX5 216 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 CCDC94Q9BW85 323 aaPredicted RBP0.79□□□□□ -2.28
CHD1-207ENST00000511628 MYH2Q9UKX2 1941 aa0.79□□□□□ -2.28
CHD1-207ENST00000511628 ROS1P08922 2347 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 NUP98P52948 1817 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 CASP8AP2Q9UKL3 1982 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 G3V2T6 193 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 M0R2N4 97 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 INE1O15225 51 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 NDUFC2O95298 119 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 ZNF25P17030 456 aaPredicted RBP0.78□□□□□ -2.28
CHD1-207ENST00000511628 NFYBP25208 207 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 G0S2P27469 103 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 RPL19P84098 196 aaKnown RBP0.78□□□□□ -2.28
CHD1-207ENST00000511628 PATE2Q6UY27 113 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 CANT1Q8WVQ1 401 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 YPEL2Q96QA6 119 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 LYSMD1Q96S90 227 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 STOML2Q9UJZ1 356 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 CEP164Q9UPV0 1460 aa0.78□□□□□ -2.28
CHD1-207ENST00000511628 ADGRB2O60241 1585 aa0.78□□□□□ -2.29
CHD1-207ENST00000511628 UBR2Q8IWV8 1755 aa0.78□□□□□ -2.29
CHD1-207ENST00000511628 MYH3P11055 1940 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 KIAA1549Q9HCM3 1950 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 DUXBA0A1W2PPF3 345 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 TCRBV4S1A1TA0A5B7 111 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 A8MWV9 139 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 H7C1C5 153 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 IFNA1P01562 189 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 IGLV1-51P01701 117 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 CXCL1P09341 107 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 PHBP35232 272 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 TAS2R41P59536 307 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 LCN6P62502 163 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 GNG3P63215 75 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 AKR1C8PQ5T2L2 129 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 PATE1Q8WXA2 126 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 ZHX1-C8orf76Q96EF9 292 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 GPX7Q96SL4 187 aaPredicted RBP0.77□□□□□ -2.29
CHD1-207ENST00000511628 NPCDR1Q9BY65 106 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 RASL12Q9NYN1 266 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 TAS2R7Q9NYW3 318 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 IL20Q9NYY1 176 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 ASB4Q9Y574 426 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 EIF3AQ14152 1382 aaKnown RBP0.77□□□□□ -2.29
CHD1-207ENST00000511628 ARHGEF11O15085 1522 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 LAMB4A4D0S4 1761 aa0.77□□□□□ -2.29
CHD1-207ENST00000511628 HEATR1Q9H583 2144 aaKnown RBP0.76□□□□□ -2.29
CHD1-207ENST00000511628 N4BP2Q86UW6 1770 aaPredicted RBP0.76□□□□□ -2.29
CHD1-207ENST00000511628 ODAMA1E959 279 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 TLCD2A6NGC4 264 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 K7ERJ3 54 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 AIPO00170 330 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 CCL16O15467 120 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 CSN2P05814 226 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 CD2P06729 351 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 HLA-EP13747 358 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms