RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GSG1LQ6UXU4 331 aa11.07□□□□□ -0.64
TPM3-219ENST00000509409 FOXI2Q6ZQN5 318 aa11.07□□□□□ -0.64
TPM3-219ENST00000509409 MAGT1Q9H0U3 335 aa11.07□□□□□ -0.64
TPM3-219ENST00000509409 SAV1Q9H4B6 383 aaPredicted RBP11.07□□□□□ -0.64
TPM3-219ENST00000509409 CCDC160A6NGH7 325 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 WRBO00258 174 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 HOXB5P09067 269 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 SPART-AS1P0CW21 52 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 SLC25A6P12236 298 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 S100A5P33763 92 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 GGNBP1Q5YKI7 109 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 CIB3Q96Q77 187 aaPredicted RBP11.06□□□□□ -0.64
TPM3-219ENST00000509409 SLC25A21Q9BQT8 299 aaPredicted RBP11.06□□□□□ -0.64
TPM3-219ENST00000509409 TMED3Q9Y3Q3 217 aa11.06□□□□□ -0.64
TPM3-219ENST00000509409 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 SMIM9A6NGZ8 99 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 SYNGR2O43760 224 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 SFT2D2O95562 160 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 CFDP00746 253 aaPredicted RBP11.05□□□□□ -0.64
TPM3-219ENST00000509409 SPATA31B1PQ5VZV4 182 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 LRTM2Q8N967 370 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 NEU1Q99519 415 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 C7orf50Q9BRJ6 194 aaKnown RBP11.05□□□□□ -0.64
TPM3-219ENST00000509409 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 SLC25A22Q9H936 323 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
TPM3-219ENST00000509409 ISLRO14498 428 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 ORM2P19652 201 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 GALR1P47211 349 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 PSG9Q00887 426 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 PPP1R1AQ13522 171 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 SPANXN5Q5MJ07 72 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
TPM3-219ENST00000509409 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 TRIM63Q969Q1 353 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 RSG1Q9BU20 258 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 RPRMQ9NS64 109 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 GOLT1BQ9Y3E0 138 aa11.04□□□□□ -0.64
TPM3-219ENST00000509409 IGKV1OR2-108A0A075B7D4 117 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 ZNF705FA8MVS1 300 aaPredicted RBP11.03□□□□□ -0.64
TPM3-219ENST00000509409 F6UB75 175 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 SOCS3O14543 225 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 ZNF705DP0CH99 300 aaPredicted RBP11.03□□□□□ -0.64
TPM3-219ENST00000509409 ZNF705BP0CI00 300 aaPredicted RBP11.03□□□□□ -0.64
TPM3-219ENST00000509409 P0DMU3 169 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 FAM78BQ5VT40 261 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 SAMD13Q5VXD3 122 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 BPIFCQ8NFQ6 507 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
TPM3-219ENST00000509409 ZNF98A6NK75 572 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 AMBPP02760 352 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 GATA2P23769 480 aaPredicted RBP11.02□□□□□ -0.65
TPM3-219ENST00000509409 S100A7P31151 101 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 MEOX2P50222 304 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 AKR1C1Q04828 323 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 ZNF79Q15937 498 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 OR1B1Q8NGR6 318 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 DEDD2Q8WXF8 326 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 CLUHP3Q96NS8 147 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 STRAPQ9Y3F4 350 aaKnown RBP11.02□□□□□ -0.65
TPM3-219ENST00000509409 V9GYH0 126 aa11.02□□□□□ -0.65
TPM3-219ENST00000509409 A0A0J9YX75 114 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 SMCO3A2RU48 225 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 H3BP45 60 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 HBE1P02100 147 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 INPP1P49441 399 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 ZNF709Q8N972 641 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 TMEM208Q9BTX3 173 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 SLC25A32Q9H2D1 315 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
TPM3-219ENST00000509409 HECTD4Q9Y4D8 3996 aa11□□□□□ -0.65
TPM3-219ENST00000509409 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
TPM3-219ENST00000509409 M0R2N4 97 aa11□□□□□ -0.65
TPM3-219ENST00000509409 IFNA21P01568 189 aa11□□□□□ -0.65
TPM3-219ENST00000509409 HTN3P15516 51 aa11□□□□□ -0.65
TPM3-219ENST00000509409 PAX9P55771 341 aa11□□□□□ -0.65
TPM3-219ENST00000509409 FGL1Q08830 312 aa11□□□□□ -0.65
TPM3-219ENST00000509409 FAM222AQ5U5X8 452 aa11□□□□□ -0.65
TPM3-219ENST00000509409 NIPSNAP3BQ9BS92 247 aa11□□□□□ -0.65
TPM3-219ENST00000509409 PSENENQ9NZ42 101 aa11□□□□□ -0.65
TPM3-219ENST00000509409 DOK5Q9P104 306 aa11□□□□□ -0.65
TPM3-219ENST00000509409 DKK2Q9UBU2 259 aa11□□□□□ -0.65
TPM3-219ENST00000509409 LOC102723971A0A1B0GUV8 181 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 PRSS46E5RG02 174 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 IL5P05113 134 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 RRN3P1Q2M238 152 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 SPANXN2Q5MJ10 180 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 TMEM182Q6ZP80 229 aaPredicted RBP10.99□□□□□ -0.65
TPM3-219ENST00000509409 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 CCDC190Q86UF4 302 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 UBE2DNLQ8IWF7 75 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 OR4D5Q8NGN0 318 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms