RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 S100ZQ8WXG8 99 aa13.64□□□□□ -0.23
UBE3D-207ENST00000509102 TMEM147Q9BVK8 224 aa13.64□□□□□ -0.23
UBE3D-207ENST00000509102 PLA2G10O15496 165 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 ORM2P19652 201 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 GALR1P47211 349 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 PSMB3P49720 205 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 MEOX2P50222 304 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 EWSR1Q01844 656 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBE3D-207ENST00000509102 CEMP1Q6PRD7 247 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-207ENST00000509102 TMEM144Q7Z5S9 345 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 ZBTB8BQ8NAP8 495 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-207ENST00000509102 OR10P1Q8NGE3 313 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 MGAT4CQ9UBM8 478 aa13.63□□□□□ -0.23
UBE3D-207ENST00000509102 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 IL5P05113 134 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 TAS2R30P59541 319 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 MZT2BQ6NZ67 158 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 OR1B1Q8NGR6 318 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 GPR82Q96P67 336 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 SLC25A22Q9H936 323 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 NUDT15Q9NV35 164 aa13.62□□□□□ -0.23
UBE3D-207ENST00000509102 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 FAM25EA8MYX2 175 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 L7N2F9 121 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 TSC22D2O75157 780 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 MIFP14174 115 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 RAP2BP61225 183 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 SELENOTP62341 195 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 VAMP2P63027 116 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 DLK1P80370 383 aa13.61□□□□□ -0.23
UBE3D-207ENST00000509102 ISLRO14498 428 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 METTL15P1P0C7V9 234 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 C4BPBP20851 252 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 CYP2G1PQ6ZSU1 146 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 ZNF431Q8TF32 576 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-207ENST00000509102 PHLDA1Q8WV24 401 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-207ENST00000509102 NPVFQ9HCQ7 196 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 RNF24Q9Y225 148 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
UBE3D-207ENST00000509102 C5orf51A6NDU8 294 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 FNDC10F2Z333 226 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 H3BMM0 161 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 H2AFB2P0C5Z0 115 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 GATA2P23769 480 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-207ENST00000509102 RRAS2P62070 204 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-207ENST00000509102 SPATA31B1PQ5VZV4 182 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 TMEM14EPQ6UXP3 125 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 C16orf92Q96LL3 132 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 WDR12Q9GZL7 423 aaKnown RBP13.59□□□□□ -0.23
UBE3D-207ENST00000509102 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 RYR2Q92736 4967 aa13.59□□□□□ -0.23
UBE3D-207ENST00000509102 DEFB4AO15263 64 aa13.58□□□□□ -0.24
UBE3D-207ENST00000509102 GIG44P09565 113 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-207ENST00000509102 EBLN2Q6P2I7 272 aa13.58□□□□□ -0.24
UBE3D-207ENST00000509102 C12orf45Q8N5I9 185 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-207ENST00000509102 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
UBE3D-207ENST00000509102 CLEC5AQ9NY25 188 aa13.58□□□□□ -0.24
UBE3D-207ENST00000509102 HIGD1AQ9Y241 93 aa13.58□□□□□ -0.24
UBE3D-207ENST00000509102 AGRNO00468 2067 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 ZNF705EA8MWA4 302 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-207ENST00000509102 CCSO14618 274 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 HYPMO75409 117 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 MBPP02686 304 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-207ENST00000509102 LINC00869P0C866 280 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 PVALBP20472 110 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-207ENST00000509102 PAX9P55771 341 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 TEPPQ6URK8 271 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 GGACTQ9BVM4 153 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 SLC25A32Q9H2D1 315 aa13.57□□□□□ -0.24
UBE3D-207ENST00000509102 SAV1Q9H4B6 383 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-207ENST00000509102 RCL1Q9Y2P8 373 aaKnown RBP13.57□□□□□ -0.24
UBE3D-207ENST00000509102 IGHV4-28A0A0C4DH34 117 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 C7orf66A4D0T2 115 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 PMS2P5A8MQ11 134 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 OR5G3P0C626 314 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 BCAP31P51572 246 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
UBE3D-207ENST00000509102 Q8NAQ8 132 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 SEC22CQ9BRL7 303 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 RSG1Q9BU20 258 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 DOK5Q9P104 306 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
UBE3D-207ENST00000509102 LSM5Q9Y4Y9 91 aaKnown RBP13.56□□□□□ -0.24
UBE3D-207ENST00000509102 SOCS3O14543 225 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 GOSR2O14653 212 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 LY6G6CO95867 125 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 IGKV3-20P01619 116 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 RPL7P18124 248 aaKnown RBP13.55□□□□□ -0.24
UBE3D-207ENST00000509102 CAV2P51636 162 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 GSG1LQ6UXU4 331 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 TMEM182Q6ZP80 229 aaPredicted RBP13.55□□□□□ -0.24
UBE3D-207ENST00000509102 ZNF546Q86UE3 836 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 ENKURQ8TC29 256 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms