RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 C16orf54Q6UWD8 224 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 TCTE3Q8IZS6 198 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 Q8N1Y9 231 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 DYNLRB2Q8TF09 96 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 TMEM37Q8WXS4 190 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 METTL26Q96S19 204 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 NEURL2Q9BR09 285 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 GINS3Q9BRX5 216 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 PBDC1Q9BVG4 233 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 NPCDR1Q9BY65 106 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 GPR61Q9BZJ8 451 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 DOK5Q9P104 306 aa7.75□□□□□ -1.17
PTPN20-220ENST00000508715 ZNF256Q9Y2P7 627 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-220ENST00000508715 ARPC5O15511 151 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 SCGB2A1O75556 95 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 GP9P14770 177 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 ORM2P19652 201 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 RPL29P47914 159 aaKnown RBP7.74□□□□□ -1.17
PTPN20-220ENST00000508715 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 OR2K2Q8NGT1 345 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 UHRF2Q96PU4 802 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 RSG1Q9BU20 258 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 CYTL1Q9NRR1 136 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 RABAC1Q9UI14 185 aa7.74□□□□□ -1.17
PTPN20-220ENST00000508715 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 ZNF98A6NK75 572 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 HMSDA8MTL9 139 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 H3BRN7 92 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 TSPAN4O14817 238 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 MRPS12O15235 138 aaKnown RBP7.73□□□□□ -1.17
PTPN20-220ENST00000508715 CFDP00746 253 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-220ENST00000508715 FABP1P07148 127 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 CD7P09564 240 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 AP2S1P53680 142 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-220ENST00000508715 DEFA6Q01524 100 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 LEMD1Q68G75 181 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 TCF24Q7RTU0 167 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 FAM24BQ8N5W8 94 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 OR1B1Q8NGR6 318 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 SHANK2-AS3Q9BTD1 123 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 SCRT1Q9BWW7 348 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 PARD6GQ9BYG4 376 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-220ENST00000508715 SLC25A39Q9BZJ4 359 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-220ENST00000508715 ARL6Q9H0F7 186 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 SLC39A9Q9NUM3 307 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 SMAD5-AS1Q9Y6J3 95 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 TENM3Q9P273 2699 aa7.73□□□□□ -1.17
PTPN20-220ENST00000508715 MPDU1O75352 247 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 HYPMO75409 117 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 B2MP61769 119 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
PTPN20-220ENST00000508715 LCN12Q6JVE5 192 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 KCNRGQ8N5I3 272 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 MFFQ9GZY8 342 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 ARV1Q9H2C2 271 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 SLC25A32Q9H2D1 315 aa7.72□□□□□ -1.17
PTPN20-220ENST00000508715 HUWE1Q7Z6Z7 4374 aaKnown RBP7.72□□□□□ -1.17
PTPN20-220ENST00000508715 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 TRAV5A0A0B4J249 113 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 C1QBP02746 253 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 OR5G3P0C626 314 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 GUCA2BQ16661 112 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 LGALSLQ3ZCW2 172 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-220ENST00000508715 SPATA31B1PQ5VZV4 182 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 AKAP14Q86UN6 197 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 GBGT1Q8N5D6 347 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 INO80EQ8NBZ0 244 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-220ENST00000508715 DCANP1Q8TF63 244 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-220ENST00000508715 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 HIGD1AQ9Y241 93 aa7.71□□□□□ -1.18
PTPN20-220ENST00000508715 TGP01266 2768 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 A0A1W2PS18 150 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 K7EQG2 157 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 SOCS3O14543 225 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 EIF3GO75821 320 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTPN20-220ENST00000508715 ATP6V0CP27449 155 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 TFPI2P48307 235 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 RAB31Q13636 194 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 ZNF345Q14585 488 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 C1orf194Q5T5A4 169 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 PXDC1Q5TGL8 231 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 LAMTOR1Q6IAA8 161 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
PTPN20-220ENST00000508715 LINC00305Q7Z4B0 112 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 HSD17B11Q8NBQ5 300 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 FAM167A-AS1Q96KT0 104 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 CITED4Q96RK1 184 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 SH3BGRL3Q9H299 93 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 DNAJC4Q9NNZ3 241 aa7.7□□□□□ -1.18
PTPN20-220ENST00000508715 NBEAL2Q6ZNJ1 2754 aa7.69□□□□□ -1.18
PTPN20-220ENST00000508715 IFNA5P01569 189 aa7.69□□□□□ -1.18
PTPN20-220ENST00000508715 NUP62P37198 522 aaPredicted RBP7.69□□□□□ -1.18
PTPN20-220ENST00000508715 ZNF124Q15973 351 aa7.69□□□□□ -1.18
PTPN20-220ENST00000508715 C10orf113Q5VZT2 155 aa7.69□□□□□ -1.18
PTPN20-220ENST00000508715 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms