RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 NFYBP25208 207 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 DYNLT3P51808 116 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 RHOGP84095 191 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 TFAMQ00059 246 aaKnown RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 LTC4SQ16873 150 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 RNASE10Q5GAN6 216 aaKnown RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 PATE2Q6UY27 113 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 Q8IYB0 196 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 LINC00471Q8N535 108 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 LINC00311Q8N616 119 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 ZNF418Q8TF45 676 aaPredicted RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 NAA38Q9BRA0 125 aaKnown RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 ADAT1Q9BUB4 502 aaKnown RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 DDA1Q9BW61 102 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 C14orf132Q9NPU4 83 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 OR52A1Q9UKL2 312 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 NISCHQ9Y2I1 1504 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 NUP210LQ5VU65 1888 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 TECPR2O15040 1411 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 NUP98P52948 1817 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 A0A1W2PRE2 83 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 MAP1LC3B2A6NCE7 125 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 TLCD2A6NGC4 264 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 A8MWV9 139 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 H0YJX3 145 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 PROSCO94903 275 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 GADD45GO95257 159 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 IFNA14P01570 189 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 PRB1P04280 392 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 HLA-EP13747 358 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 ROMO1P60602 79 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 DR1Q01658 176 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 DEFB113Q30KQ7 82 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 C1orf140Q5VVS0 124 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 DCUN1D2Q6PH85 259 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 UNQ6190/PRO20217Q6UXQ8 127 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 PHF5AQ7RTV0 110 aaKnown RBP0.67□□□□□ -2.3
SMN2-208ENST00000508258 RPS19BP1Q86WX3 136 aaKnown RBP0.67□□□□□ -2.3
SMN2-208ENST00000508258 FAM24BQ8N5W8 94 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 C12orf29Q8N999 325 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.67□□□□□ -2.3
SMN2-208ENST00000508258 C15orf53Q8NAA6 179 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 LINC00301Q8NCQ3 95 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 OR10K1Q8NGX5 313 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 TEX47Q8TBZ9 253 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 CARD19Q96LW7 228 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 NPCDR1Q9BY65 106 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 MAP1LC3BQ9GZQ8 125 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 POPDC3Q9HBV1 291 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 OR5AC2Q9NZP5 309 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 ASB4Q9Y574 426 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 PIK3C2AO00443 1686 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 FBN1P35555 2871 aaKnown RBP0.67□□□□□ -2.3
SMN2-208ENST00000508258 MYH3P11055 1940 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 MYH2Q9UKX2 1941 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 LAMB2P55268 1798 aa0.67□□□□□ -2.3
SMN2-208ENST00000508258 FRMPD1Q5SYB0 1578 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 TAF1LQ8IZX4 1826 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 CR1P17927 2039 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 MICAL3Q7RTP6 2002 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 ARHGEF11O15085 1522 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 FN1P02751 2386 aaKnown RBP0.66□□□□□ -2.3
SMN2-208ENST00000508258 TRAV14DV4A0A0A6YYC5 116 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 TRAV5A0A0B4J249 113 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 B4DSR2 109 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 HCRTO43612 131 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 IFNA21P01568 189 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 CXCL1P09341 107 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 BRS3P32247 399 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 ARPP19P56211 112 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 RAB4BP61018 213 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 MYL5Q02045 173 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 PLCXD2Q0VAA5 305 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 RTL8BQ17RB0 113 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 FKBP1CQ5VVH2 108 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
SMN2-208ENST00000508258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.66□□□□□ -2.3
SMN2-208ENST00000508258 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 PRR15Q8IV56 129 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 OR4C6Q8NH72 309 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 SFT2D1Q8WV19 159 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 SLC25A21Q9BQT8 299 aaPredicted RBP0.66□□□□□ -2.3
SMN2-208ENST00000508258 REG4Q9BYZ8 158 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 CHCHD2Q9Y6H1 151 aaPredicted RBP0.66□□□□□ -2.3
SMN2-208ENST00000508258 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
SMN2-208ENST00000508258 PCNX2A6NKB5 2137 aa0.65□□□□□ -2.3
SMN2-208ENST00000508258 TRDV1A0A1B0GX56 115 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 GNG14A0A1W2PPG7 69 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 ODAMA1E959 279 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 PRORSD1PA6NEY8 169 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 H7BYZ3 331 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 DHFRP00374 187 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 IGLV1-51P01701 117 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 NBEAP1P0C6P0 100 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 TMBIM6P55061 237 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 CDK5R1Q15078 307 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 MSMO1Q15800 293 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 KRTAP21-3Q3LHN1 58 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 C1orf137Q5JT78 98 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms