RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 FMC1Q96HJ9 113 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 ASCL2Q99929 193 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 ZNF492Q9P255 531 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 PKDREJQ9NTG1 2253 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 MUC21A0A0G2JKD1 596 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 MUC21A0A140T8X8 626 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 CT83Q5H943 113 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 LYPD2Q6UXB3 125 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 COLQQ9Y215 455 aaPredicted RBP10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 OR2T8A6NH00 312 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 CHEK1O14757 476 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 ENSAO43768 121 aaKnown RBP10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 CRYGCP07315 174 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 CSN3P07498 182 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 CD40P25942 277 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 MEF2CQ06413 473 aaPredicted RBP10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 FOXE3Q13461 319 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 FAM162BQ5T6X4 162 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 SLC25A34Q6PIV7 304 aa10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
SNCAIP-209ENST00000508017 CNTFRP26992 372 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 RNF151Q2KHN1 245 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 Q86TA4 180 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 TMUB1Q9BVT8 246 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 SCRT2Q9NQ03 307 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 TRAV30A0A087WSZ9 112 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 CBY3A6NI87 242 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 OVOL3O00110 214 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 APOHP02749 345 aaPredicted RBP10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 EXOC3-AS1Q8N2X6 119 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 TRGV9Q99603 122 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 TMEM191AQ9H0A3 160 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 RNF24Q9Y225 148 aa10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 SOX21Q9Y651 276 aaPredicted RBP10.72□□□□□ -0.69
SNCAIP-209ENST00000508017 COL8A1P27658 744 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 CDKN1BP46527 198 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 DLX1P56177 255 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 PRB3Q04118 309 aaPredicted RBP10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 C3orf36Q3SXR2 165 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 VMA21Q3ZAQ7 101 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 PRNTQ86SH4 94 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 NDFIP1Q9BT67 221 aa10.71□□□□□ -0.69
SNCAIP-209ENST00000508017 A0A087X0K7 114 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 LIPFP07098 398 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 TMEM186Q96B77 213 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 MAP1LC3CQ9BXW4 147 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 ZNF785A8K8V0 405 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 NPIPB6E9PJ23 425 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 GOLT1AQ6ZVE7 132 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 MALRD1Q5VYJ5 2156 aa10.7□□□□□ -0.7
SNCAIP-209ENST00000508017 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 PSG1P11464 419 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 LYZP61626 148 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 RHOGP84095 191 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 ETFRF1Q6IPR1 90 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 ZADH2Q8N4Q0 377 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 DEFB125Q8N687 156 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 C8orf46Q8TAG6 207 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 HAX1O00165 279 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 C1orf185Q5T7R7 199 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 PET117Q6UWS5 81 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 CUL9Q8IWT3 2517 aa10.69□□□□□ -0.7
SNCAIP-209ENST00000508017 C17orf100A8MU93 164 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 SNAI2O43623 268 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 TNFRSF1AP19438 455 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 HTR1DP28221 377 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 RPL27AP46776 148 aaKnown RBP10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 ADIPOQQ15848 244 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 AMMECR1LQ6DCA0 310 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 PVRIGQ6DKI7 326 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 LINC00311Q8N616 119 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 TEX45Q8NA69 505 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 CCL17Q92583 94 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 CNOT1A5YKK6 2376 aaKnown RBP10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 PPIAL4EA0A075B759 164 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 PPIAL4DF5H284 164 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 NCR2O95944 276 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 PPIAL4FP0DN26 164 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 FAM71F2Q6NXP2 309 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 NEU4Q8WWR8 484 aaPredicted RBP10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 HIGD1AQ9Y241 93 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
SNCAIP-209ENST00000508017 EP300Q09472 2414 aaPredicted RBP10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 TMEM178BH3BS89 294 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 NDUFB3O43676 98 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 LOXP28300 417 aaPredicted RBP10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 DLX6P56179 175 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 LDLRAD2Q5SZI1 272 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms