RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ISLRO14498 428 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 SOCS3O14543 225 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 GYG2O15488 501 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 WBP4O75554 376 aaKnown RBP4.74□□□□□ -1.65
VCAN-207ENST00000507162 PGLYRP1O75594 196 aaPredicted RBP4.74□□□□□ -1.65
VCAN-207ENST00000507162 PPYP01298 95 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 RLN1P04808 185 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 RD3LP0DJH9 198 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 FCGR1AP12314 374 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 OR10J1P30954 320 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 YPEL3P61236 119 aaPredicted RBP4.74□□□□□ -1.65
VCAN-207ENST00000507162 GAMTQ14353 236 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 WFDC2Q14508 124 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 Q6ZTI0 123 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 H2BFWTQ7Z2G1 175 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 NEGR1Q7Z3B1 354 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 MS4A15Q8N5U1 240 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 LINC00612Q8N6U2 182 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 OR1S2Q8NGQ3 325 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 RNASE8Q8TDE3 154 aaKnown RBP4.74□□□□□ -1.65
VCAN-207ENST00000507162 TMEM263Q8WUH6 116 aaKnown RBP4.74□□□□□ -1.65
VCAN-207ENST00000507162 NUDCD2Q8WVJ2 157 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 PBDC1Q9BVG4 233 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 ATG5Q9H1Y0 275 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 DAPK2Q9UIK4 370 aa4.74□□□□□ -1.65
VCAN-207ENST00000507162 LOC100130705A0A1B0GUX0 176 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 METTL21EPA6NDL7 271 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 EFCAB10A6NFE3 127 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 A8MTW9 85 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 BOLA2-SMG1P6H3BVE0 249 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 CORTO00230 105 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 MYL12BO14950 172 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 PRAF2O60831 178 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 ZNF324O75467 553 aaPredicted RBP4.73□□□□□ -1.65
VCAN-207ENST00000507162 CCNKO75909 580 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 UCHL1P09936 223 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 IGLC1P0CG04 106 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 RNASE2P10153 161 aaKnown RBP4.73□□□□□ -1.65
VCAN-207ENST00000507162 CALRP27797 417 aaKnown RBP4.73□□□□□ -1.65
VCAN-207ENST00000507162 RND2P52198 227 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 ZNF415Q09FC8 603 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 ASAH1Q13510 395 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 MRPL23Q16540 153 aaKnown RBP4.73□□□□□ -1.65
VCAN-207ENST00000507162 IGFL4Q6B9Z1 124 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 SLC35G3Q8N808 338 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 PPP1R14BQ96C90 147 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 V9GY05 133 aa4.73□□□□□ -1.65
VCAN-207ENST00000507162 TMEM235A6NFC5 223 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 IGHV3-53P01767 116 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 TNFSF8P32971 234 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 RANBP1P43487 201 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 CDKN1BP46527 198 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 OR10A3P58181 314 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 GNG2P59768 71 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 ARL6IP1Q15041 203 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 IZUMO4Q1ZYL8 232 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 OR8I2Q8N0Y5 310 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 OR52E5Q8NH55 327 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 TMEM37Q8WXS4 190 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 ENY2Q9NPA8 101 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 CACNG5Q9UF02 275 aa4.72□□□□□ -1.65
VCAN-207ENST00000507162 PRSS47A8MTI9 375 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 IBA57-AS1B1ANH7 110 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 E5RGE8 158 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 GYPEP15421 78 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 CBX5P45973 191 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 RPL5P46777 297 aaKnown RBP4.71□□□□□ -1.66
VCAN-207ENST00000507162 HSPA13P48723 471 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 HERV-K104P61576 105 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 RPS25P62851 125 aaKnown RBP4.71□□□□□ -1.66
VCAN-207ENST00000507162 HIST1H1AQ02539 215 aaPredicted RBP4.71□□□□□ -1.66
VCAN-207ENST00000507162 PRSS54Q6PEW0 395 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 NPIPB3Q92617 1050 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 C8orf49Q96NF6 230 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 RSG1Q9BU20 258 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 TM2D2Q9BX73 214 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 CCDC90BQ9GZT6 254 aa4.71□□□□□ -1.66
VCAN-207ENST00000507162 TRGV1A0A0A0MS02 117 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 H7BYZ3 331 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 SSX5O60225 188 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 TOMM40O96008 361 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 OR5AC1P0C628 307 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 PSG1P11464 419 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 SRIP30626 198 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 NUP62P37198 522 aaPredicted RBP4.7□□□□□ -1.66
VCAN-207ENST00000507162 FGL1Q08830 312 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 TDRG1Q3Y452 100 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 DNAL1Q4LDG9 190 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 IDNKQ5T6J7 187 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 CFAP161Q6P656 301 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 RNF182Q8N6D2 247 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 HSD17B11Q8NBQ5 300 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 ZNF738Q8NE65 137 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 BEST4Q8NFU0 473 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 BAALCQ8WXS3 180 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 BORCS5Q969J3 196 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 ACY3Q96HD9 319 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 SEC22AQ96IW7 307 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 PAXXQ9BUH6 204 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms