RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SELENOKQ9Y6D0 94 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 HEATR1Q9H583 2144 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 NAV3Q8IVL0 2385 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 RBPJQ06330 500 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 FAM201AQ5SY85 155 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 ZNF833PQ6ZTB9 187 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 Q9H3A6 140 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 A0A1B0GUT8 65 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 C9orf172C9J069 976 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 ADAMTSL5Q6ZMM2 481 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 Q86TA4 180 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 OR5A1Q8NGJ0 315 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 VSTM2AQ8TAG5 236 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 JKAMPQ9P055 326 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 KNTC1P50748 2209 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 A0A096LNJ9 63 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 C22orf46C9J442 243 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 SIVA1O15304 175 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 KLK10O43240 276 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 SUB1P53999 127 aaKnown RBP eCLIP13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 TMEM30BQ3MIR4 351 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 CNEP1R1Q8N9A8 125 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 OR9G4Q8NGQ1 327 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 NAA38Q9BRA0 125 aaKnown RBP13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 NPFFR1Q9GZQ6 430 aa13.69□□□□□ -0.22
SQSTM1-211ENST00000506690 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 SMIM17P0DL12 118 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 LGALS7P47929 136 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 FA2HQ7L5A8 372 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 MRPL20Q9BYC9 149 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 HILPDAQ9Y5L2 63 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 A0A1W2PPM0 123 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 CD59P13987 128 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 LGALS9BQ3B8N2 356 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 PLA2G2CQ5R387 149 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 HES3Q5TGS1 186 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 RPRMLQ8N4K4 120 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 PRSS3P2Q8NHM4 247 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 TMEM167AQ8TBQ9 72 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
SQSTM1-211ENST00000506690 A1L4Q6 167 aa13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 CDX4O14627 284 aaPredicted RBP13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 IGLV2-11P01706 119 aa13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 ARMS2P0C7Q2 107 aa13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 KIR2DL2P43627 348 aaPredicted RBP13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 C10orf55Q5SWW7 151 aa13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
SQSTM1-211ENST00000506690 TRAV8-1A0A0A6YYK1 113 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 TTC28Q96AY4 2481 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 H3BTX0 84 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 TM4SF5O14894 197 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 FAM106CPP0CH98 169 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 RIGQ13278 110 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 FAM106AQ4KMX7 169 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 OR4X2Q8NGF9 303 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 OR4A5Q8NH83 315 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 SPCS1Q9Y6A9 102 aa13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 RAI1Q7Z5J4 1906 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-211ENST00000506690 CRYGCP07315 174 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 Q71RC1 249 aaPredicted RBP13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 OR8A1Q8NGG7 326 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 FLYWCH2Q96CP2 140 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 TRGV9Q99603 122 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 THYN1Q9P016 225 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 DKK4Q9UBT3 224 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 NHLH1Q02575 133 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 ABHD17AQ96GS6 310 aa13.65□□□□□ -0.22
SQSTM1-211ENST00000506690 A0A1B0GW15 77 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 hADV38S2A0JD32 116 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 ZADH2Q8N4Q0 377 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 TMEM116Q8NCL8 245 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 RAB37Q96AX2 223 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 OTORQ9NRC9 128 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 INSIG2Q9Y5U4 225 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 ARFGEF3Q5TH69 2177 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 PPIAL4GP0DN37 164 aa13.64□□□□□ -0.23
SQSTM1-211ENST00000506690 DSPP15924 2871 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 SPRY3O43610 288 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 PLP1P60201 277 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 C1orf185Q5T7R7 199 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 PRNTQ86SH4 94 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 SRSF12Q8WXF0 261 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 GATA4P43694 442 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 SAMD13Q5VXD3 122 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 OR4C13Q8NGP0 309 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 OR10X1Q8NGY0 326 aa13.63□□□□□ -0.23
SQSTM1-211ENST00000506690 C8orf46Q8TAG6 207 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms