RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ARL6Q9H0F7 186 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 ARV1Q9H2C2 271 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 SMCO4Q9NRQ5 59 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 CYTL1Q9NRR1 136 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 UQCC1Q9NVA1 299 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 GAR1Q9NY12 217 aaKnown RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 MRPL36Q9P0J6 103 aaKnown RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 WDR83OSQ9Y284 106 aa5.58□□□□□ -1.52
NUP54-204ENST00000506098 LSM4Q9Y4Z0 139 aaKnown RBP5.58□□□□□ -1.52
NUP54-204ENST00000506098 IGKV1D-37A0A075B6S9 117 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 IGKV1OR2-108A0A075B7D4 117 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 TRAV30A0A087WSZ9 112 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
NUP54-204ENST00000506098 IGHV3-21A0A0B4J1V1 117 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 KANTRA0A1W2PQU2 76 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 SEC14L6B5MCN3 397 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 MPDU1O75352 247 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 JTBO76095 146 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 STAG3L2P0CL84 134 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 FGF7P21781 194 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 NPBWR1P48145 328 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 RND2P52198 227 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 SELENOTP62341 195 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 DEFA5Q01523 94 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 ZNF266Q14584 549 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 CLINT1Q14677 625 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 OPCMLQ14982 345 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 ACSM6Q6P461 480 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 TEPPQ6URK8 271 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 ATRAIDQ6UW56 229 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 LCNL1Q6ZST4 164 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 UBAC2Q8NBM4 344 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 NPIPB3Q92617 1050 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 CCDC140Q96MF4 163 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 TRGV9Q99603 122 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 SMIM3Q9BZL3 60 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 WDR61Q9GZS3 305 aaKnown RBP5.57□□□□□ -1.52
NUP54-204ENST00000506098 CLEC5AQ9NY25 188 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 C21orf62Q9NYP8 219 aa5.57□□□□□ -1.52
NUP54-204ENST00000506098 BORCS7-ASMTA0A0B4J1R7 106 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 GNG7O60262 68 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 IFNA5P01569 189 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 IGHV3-48P01763 117 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 CTSGP08311 255 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 LGALS1P09382 135 aaKnown RBP5.56□□□□□ -1.52
NUP54-204ENST00000506098 IGLC1P0CG04 106 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 CD28P10747 220 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 KRTAP10-3P60369 221 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 YPEL3P61236 119 aaPredicted RBP5.56□□□□□ -1.52
NUP54-204ENST00000506098 AKR1C1Q04828 323 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 AWAT1Q58HT5 328 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 PYY3Q5JQD4 70 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 FAM74A1Q5RGS3 127 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 RPL7L1Q6DKI1 246 aaKnown RBP5.56□□□□□ -1.52
NUP54-204ENST00000506098 SPSB3Q6PJ21 355 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 RXFP4Q8TDU9 374 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 C4orf3Q8WVX3 66 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 ACY3Q96HD9 319 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 ZNF414Q96IQ9 312 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 RNF2Q99496 336 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 GINS3Q9BRX5 216 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 SEC11CQ9BY50 192 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 ZFP30Q9Y2G7 519 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 TSSC4Q9Y5U2 329 aaPredicted RBP5.56□□□□□ -1.52
NUP54-204ENST00000506098 TENM1Q9UKZ4 2725 aa5.56□□□□□ -1.52
NUP54-204ENST00000506098 SORL1Q92673 2214 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
NUP54-204ENST00000506098 UBE2L5PA0A1B0GUS4 154 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 TCRBV4S1A1TA0A5B7 111 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 OR2T8A6NH00 312 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 COLCA2A8K830 154 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 ADARB2-AS1A8MUL3 147 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 AGPAT2O15120 278 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 TGOLN2O43493 480 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 IGKV1-17P01599 117 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 CLEC3BP05452 202 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 OR10J1P30954 320 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 ADMP35318 185 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 RPL29P47914 159 aaKnown RBP5.55□□□□□ -1.52
NUP54-204ENST00000506098 Q56UQ5 140 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 PET117Q6UWS5 81 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 BTNL8Q6UX41 500 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 CLEC19AQ6UXS0 136 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 BAP18Q8IXM2 172 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 SCGB1C1Q8TD33 95 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 TMEM158Q8WZ71 300 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 PHYHIPLQ96FC7 376 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 MGST2Q99735 147 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 CITED1Q99966 193 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 PSMG3Q9BT73 122 aaPredicted RBP5.55□□□□□ -1.52
NUP54-204ENST00000506098 CHRDL1Q9BU40 450 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 C19orf24Q9BVV8 132 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 GGTLC1Q9BX51 225 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 NPCDR1Q9BY65 106 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 GNB4Q9HAV0 340 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 SLC45A2Q9UMX9 530 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 S4R3C0 116 aa5.55□□□□□ -1.52
NUP54-204ENST00000506098 WI2-2373I1.2A0A1W2PRP0 233 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms