RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 PPP5D1E7EU14 171 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 TEX46H3BTG2 121 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 I3L521 148 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 NDUFA4O00483 81 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 COX7A2P2O60397 106 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 HBE1P02100 147 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 H2AFB1P0C5Y9 115 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 FHITP49789 147 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 LYZP61626 148 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 ZNF726P1Q15940 193 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 GCSAMLQ5JQS6 135 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 FAM122CQ6P4D5 195 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 PATE2Q6UY27 113 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 LYPD6BQ8NI32 183 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 C4orf3Q8WVX3 66 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 ZNF414Q96IQ9 312 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 GNB4Q9HAV0 340 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 MRPL27Q9P0M9 148 aaKnown RBP8.71□□□□□ -1.02
SGCA-205ENST00000505964 RNF24Q9Y225 148 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 FUT9Q9Y231 359 aa8.71□□□□□ -1.02
SGCA-205ENST00000505964 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.02
SGCA-205ENST00000505964 ANKRD34BA5PLL1 514 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 BMPR1BO00238 502 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 TRBV12-3P01733 135 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 HSPB1P04792 205 aaKnown RBP8.7□□□□□ -1.02
SGCA-205ENST00000505964 IL4P05112 153 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 ORM2P19652 201 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 TAS2R45P59539 299 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 FAM78BQ5VT40 261 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 GPHB5Q86YW7 130 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 OR1B1Q8NGR6 318 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 RAB24Q969Q5 203 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 SEPSECSQ9HD40 501 aaKnown RBP8.7□□□□□ -1.02
SGCA-205ENST00000505964 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
SGCA-205ENST00000505964 TSSC4Q9Y5U2 329 aaPredicted RBP8.7□□□□□ -1.02
SGCA-205ENST00000505964 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 NUDT19A8MXV4 375 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 G3V4G9 280 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 STAG3L2P0CL84 134 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 STAG3L3P0CL85 134 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 CD28P10747 220 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 ZP3P21754 424 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 USF2Q15853 346 aaPredicted RBP8.69□□□□□ -1.02
SGCA-205ENST00000505964 LINC00305Q7Z4B0 112 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 OR5B12Q96R08 314 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 SLC25A22Q9H936 323 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 MED9Q9NWA0 146 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 TECRQ9NZ01 308 aaKnown RBP8.69□□□□□ -1.02
SGCA-205ENST00000505964 DOK5Q9P104 306 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 PFDN2Q9UHV9 154 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 RABAC1Q9UI14 185 aa8.69□□□□□ -1.02
SGCA-205ENST00000505964 LINC00862A6NCI5 91 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 C8orf88P0DMB2 117 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 PMS2P11Q13670 270 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 NDUFA5Q16718 116 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 RPEL1Q2QD12 228 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 FAM106AQ4KMX7 169 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 KHDC3LQ587J8 217 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 KHDC1LQ5JSQ8 128 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 PQLC2Q6ZP29 291 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 SSX7Q7RTT5 188 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 STXBP6Q8NFX7 210 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 SFT2D1Q8WV19 159 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 PCNPQ8WW12 178 aaKnown RBP8.68□□□□□ -1.02
SGCA-205ENST00000505964 TMEM190Q8WZ59 177 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 SHANK2-AS3Q9BTD1 123 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 PBDC1Q9BVG4 233 aa8.68□□□□□ -1.02
SGCA-205ENST00000505964 SLC25A39Q9BZJ4 359 aaPredicted RBP8.68□□□□□ -1.02
SGCA-205ENST00000505964 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 A0A087WW49 117 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 IGHV3-35A0A0C4DH35 117 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 H3BRN7 92 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 K7EMT4 169 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 LGALS9O00182 355 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 CXorf1O96002 111 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 SPATA31B1PQ5VZV4 182 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 LCN15Q6UWW0 184 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 REC114Q7Z4M0 266 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 KLHL30-AS1Q8NEE0 82 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 UHRF2Q96PU4 802 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 METTL26Q96S19 204 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 CITED2Q99967 270 aaPredicted RBP8.67□□□□□ -1.02
SGCA-205ENST00000505964 HRH4Q9H3N8 390 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 DNAH9Q9NYC9 4486 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
SGCA-205ENST00000505964 LINC01619G3V211 115 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 NPPCP23582 126 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 CRYBB3P26998 211 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 PSMB3P49720 205 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 PPT1P50897 306 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 BEAN1Q3B7T3 259 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 C1orf194Q5T5A4 169 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 IL34Q6ZMJ4 242 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 NDUFA11Q86Y39 141 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
SGCA-205ENST00000505964 DPF1Q92782 380 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms