RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 ZNF90Q03938 601 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 CASC10Q5T4H9 136 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 ZBTB8BQ8NAP8 495 aaPredicted RBP6.61□□□□□ -1.35
PTPN20-215ENST00000505814 NUDT10Q8NFP7 164 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 RNF125Q96EQ8 232 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 NUDT11Q96G61 164 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 SMIM8Q96KF7 97 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 METTL26Q96S19 204 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 TMEM231Q9H6L2 316 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 NUDT15Q9NV35 164 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 SLC45A2Q9UMX9 530 aa6.61□□□□□ -1.35
PTPN20-215ENST00000505814 A0A1W2PS18 150 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 TSC22D2O75157 780 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 UPK1BO75841 260 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 IL4P05112 153 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 IL5P05113 134 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 GIG44P09565 113 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-215ENST00000505814 NKX2-1P43699 371 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-215ENST00000505814 INPP1P49441 399 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-215ENST00000505814 POLR2GP62487 172 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN20-215ENST00000505814 ACOT7LQ6ZUV0 252 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 OR51G1Q8NGK1 321 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 ZNF431Q8TF32 576 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-215ENST00000505814 Q8WTZ3 238 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 RNF183Q96D59 192 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 ACY3Q96HD9 319 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 MAGT1Q9H0U3 335 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 UBQLN2Q9UHD9 624 aa6.6□□□□□ -1.35
PTPN20-215ENST00000505814 IGHV3-66A0A0C4DH42 116 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 LINC00854A0A1B0GVQ3 168 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 A8MTW9 85 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 H3BP45 60 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 WRBO00258 174 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 CCNKO75909 580 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 MBPP02686 304 aaPredicted RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 IFNA4P05014 189 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 RD3LP0DJH9 198 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 NUP62P37198 522 aaPredicted RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 EIF2B2P49770 351 aaKnown RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 PLP1P60201 277 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 RAB11AP62491 216 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 IAH1Q2TAA2 248 aaPredicted RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 C4orf46Q504U0 113 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 C1orf194Q5T5A4 169 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 TMEM182Q6ZP80 229 aaPredicted RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 TMEM144Q7Z5S9 345 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 TRPT1Q86TN4 253 aaKnown RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 APRG1Q8IVJ8 170 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 SLC35E1Q96K37 410 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 WDR12Q9GZL7 423 aaKnown RBP6.59□□□□□ -1.35
PTPN20-215ENST00000505814 BATF3Q9NR55 127 aa6.59□□□□□ -1.35
PTPN20-215ENST00000505814 KMT2AQ03164 3969 aa6.59□□□□□ -1.36
PTPN20-215ENST00000505814 C7orf66A4D0T2 115 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 HELTA6NFD8 242 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 CFDP00746 253 aaPredicted RBP6.58□□□□□ -1.36
PTPN20-215ENST00000505814 APOC4P55056 127 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 DLK1P80370 383 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 EWSR1Q01844 656 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN20-215ENST00000505814 ARL16Q0P5N6 197 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 ZNF846Q147U1 533 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 Q8N1X5 172 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 RAB40CQ96S21 281 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 SEC22CQ9BRL7 303 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 NRN1Q9NPD7 142 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 RABAC1Q9UI14 185 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
PTPN20-215ENST00000505814 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
PTPN20-215ENST00000505814 TRAV6A0A075B6T7 132 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 ZFP92A6NM28 416 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 CCSO14618 274 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 SSSCA1O60232 199 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 IFNA21P01568 189 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 DEFB131AP59861 70 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 PAFAH1B2P68402 229 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 RPP30P78346 268 aaKnown RBP6.57□□□□□ -1.36
PTPN20-215ENST00000505814 VWC2Q2TAL6 325 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 SPANXN5Q5MJ07 72 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 GBGT1Q8N5D6 347 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 CSNK1G2-AS1Q8NCQ2 148 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 GATAD1Q8WUU5 269 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 MARVELD1Q9BSK0 173 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 GGACTQ9BVM4 153 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 C11orf68Q9H3H3 251 aaKnown RBP6.57□□□□□ -1.36
PTPN20-215ENST00000505814 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
PTPN20-215ENST00000505814 FAM240BA0A1B0GVZ2 78 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 ZNF705EA8MWA4 302 aaPredicted RBP6.56□□□□□ -1.36
PTPN20-215ENST00000505814 SNRPGP15A8MWD9 76 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 H3BRN7 92 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 MRPS12O15235 138 aaKnown RBP6.56□□□□□ -1.36
PTPN20-215ENST00000505814 C4BPBP20851 252 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 TFPI2P48307 235 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 AP2S1P53680 142 aaPredicted RBP6.56□□□□□ -1.36
PTPN20-215ENST00000505814 DEFB135Q30KP9 77 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 SIGLEC15Q6ZMC9 328 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 NRARPQ7Z6K4 114 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
PTPN20-215ENST00000505814 PSENENQ9NZ42 101 aa6.56□□□□□ -1.36
PTPN20-215ENST00000505814 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms