RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 TNFSF4P23510 183 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
UBE3D-206ENST00000505226 PMCHL2Q9BQD1 86 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 ZNF835Q9Y2P0 537 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 LOC102724200A0A096LPH7 203 aaPredicted RBP9.48□□□□□ -0.89
UBE3D-206ENST00000505226 LEPROTL1O95214 131 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 C3orf36Q3SXR2 165 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 VSTM2AQ8TAG5 236 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 C1RLQ9NZP8 487 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 WASHC3Q9Y3C0 194 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 CNOT1A5YKK6 2376 aaKnown RBP9.48□□□□□ -0.89
UBE3D-206ENST00000505226 TAX1BP3O14907 124 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 MEF2CQ06413 473 aaPredicted RBP9.48□□□□□ -0.89
UBE3D-206ENST00000505226 EXOC3-AS1Q8N2X6 119 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 C5orf17Q8NAS9 161 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 CTSZQ9UBR2 303 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 LRBAP50851 2863 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 NUDT3O95989 172 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 PVRIGQ6DKI7 326 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 RBPMS2Q6ZRY4 209 aaKnown RBP9.48□□□□□ -0.89
UBE3D-206ENST00000505226 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
UBE3D-206ENST00000505226 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
UBE3D-206ENST00000505226 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 H0Y8G0 127 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 ENSAO43768 121 aaKnown RBP9.47□□□□□ -0.89
UBE3D-206ENST00000505226 CT83Q5H943 113 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 BVES-AS1Q5T3Y7 98 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 TRGV9Q99603 122 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 ZNF492Q9P255 531 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 SPAARA0A1B0GVQ0 90 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 DLX6P56179 175 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 ADIPOQQ15848 244 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 TMEM116Q8NCL8 245 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 TMEM186Q96B77 213 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 SVEP1Q4LDE5 3571 aa9.47□□□□□ -0.89
UBE3D-206ENST00000505226 MUC21A0A0G2JKD1 596 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 MUC21A0A140T8X8 626 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 K7EM74 188 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 TNFRSF13BO14836 293 aaPredicted RBP9.46□□□□□ -0.89
UBE3D-206ENST00000505226 LRRC10Q5BKY1 277 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 MUC21Q5SSG8 566 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 ZADH2Q8N4Q0 377 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 CCL17Q92583 94 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 PCNX1Q96RV3 2341 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 NDFIP1Q9BT67 221 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 SCRT2Q9NQ03 307 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 CACNA1HO95180 2353 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 OR2T8A6NH00 312 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 C17orf100A8MU93 164 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 M0R296 226 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 CSN3P07498 182 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 Q86TA4 180 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 DEFB123Q8N688 67 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 C17orf77Q96MU5 243 aa9.46□□□□□ -0.89
UBE3D-206ENST00000505226 TMEM178BH3BS89 294 aa9.46□□□□□ -0.9
UBE3D-206ENST00000505226 LOXP28300 417 aaPredicted RBP9.46□□□□□ -0.9
UBE3D-206ENST00000505226 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.9
UBE3D-206ENST00000505226 NEU4Q8WWR8 484 aaPredicted RBP9.46□□□□□ -0.9
UBE3D-206ENST00000505226 C22orf15Q8WYQ4 148 aa9.46□□□□□ -0.9
UBE3D-206ENST00000505226 GFRA4Q9GZZ7 299 aa9.46□□□□□ -0.9
UBE3D-206ENST00000505226 MALRD1Q5VYJ5 2156 aa9.46□□□□□ -0.9
UBE3D-206ENST00000505226 VAMP3Q15836 100 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 C1orf185Q5T7R7 199 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 PRNTQ86SH4 94 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 TIMM8BQ9Y5J9 83 aaPredicted RBP9.45□□□□□ -0.9
UBE3D-206ENST00000505226 PSG1P11464 419 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 COL8A1P27658 744 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 VMA21Q3ZAQ7 101 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 GOLT1AQ6ZVE7 132 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 NUP37Q8NFH4 326 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 OR4C5Q8NGB2 326 aa9.45□□□□□ -0.9
UBE3D-206ENST00000505226 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
UBE3D-206ENST00000505226 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 A0A087X0K7 114 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 HAX1O00165 279 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 CHEK1O14757 476 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 CEACAM4O75871 244 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 NCR2O95944 276 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 FAM106CPP0CH98 169 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 FAM106AQ4KMX7 169 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 SLC25A34Q6PIV7 304 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
UBE3D-206ENST00000505226 KLK10O43240 276 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 CRYGBP07316 175 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 ARMS2P0C7Q2 107 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 TNFRSF1AP19438 455 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 DEFB124Q8NES8 71 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 RELNP78509 3460 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 PLP1P60201 277 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 LYZP61626 148 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms