RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MIFP14174 115 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 ZNF575Q86XF7 245 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 ZNF709Q8N972 641 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 SLC35E1Q96K37 410 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 MFFQ9GZY8 342 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 HRH4Q9H3N8 390 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 TBC1D24Q9ULP9 559 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 HLA-DRB4X5D2U9 266 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 C9orf170A2RU37 121 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 PRSS29PA6NIE9 313 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 IGLL5B9A064 214 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 SLC25A6P12236 298 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 FAUP35544 74 aaKnown RBP9.42□□□□□ -0.9
DDX41-204ENST00000504807 AP2S1P53680 142 aaPredicted RBP9.42□□□□□ -0.9
DDX41-204ENST00000504807 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 NOXA1Q86UR1 476 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 MAPKAPK5-AS1Q8N8E1 139 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 TRGV9Q99603 122 aa9.42□□□□□ -0.9
DDX41-204ENST00000504807 SLC25A21Q9BQT8 299 aaPredicted RBP9.42□□□□□ -0.9
DDX41-204ENST00000504807 PAIP2BQ9ULR5 123 aaKnown RBP9.42□□□□□ -0.9
DDX41-204ENST00000504807 LINC00854A0A1B0GVQ3 168 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 PMS2P5A8MQ11 134 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 SYNGR2O43760 224 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 NDUFB6O95139 128 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
DDX41-204ENST00000504807 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
DDX41-204ENST00000504807 PAX9P55771 341 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 AP3S2P59780 193 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 UBE2MP61081 183 aaKnown RBP9.41□□□□□ -0.9
DDX41-204ENST00000504807 IGFL4Q6B9Z1 124 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 ZNF705AQ6ZN79 300 aaPredicted RBP9.41□□□□□ -0.9
DDX41-204ENST00000504807 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 SLC35B3Q9H1N7 401 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 SLC25A32Q9H2D1 315 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 SAV1Q9H4B6 383 aaPredicted RBP9.41□□□□□ -0.9
DDX41-204ENST00000504807 TMED3Q9Y3Q3 217 aa9.41□□□□□ -0.9
DDX41-204ENST00000504807 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
DDX41-204ENST00000504807 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
DDX41-204ENST00000504807 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
DDX41-204ENST00000504807 ANXA7P20073 488 aaKnown RBP9.4□□□□□ -0.9
DDX41-204ENST00000504807 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.9
DDX41-204ENST00000504807 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDX41-204ENST00000504807 ID3Q02535 119 aa9.4□□□□□ -0.9
DDX41-204ENST00000504807 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.9
DDX41-204ENST00000504807 SPANXN5Q5MJ07 72 aa9.4□□□□□ -0.9
DDX41-204ENST00000504807 ACOT7LQ6ZUV0 252 aa9.4□□□□□ -0.9
DDX41-204ENST00000504807 OR4D5Q8NGN0 318 aa9.4□□□□□ -0.9
DDX41-204ENST00000504807 SEPSECSQ9HD40 501 aaKnown RBP9.4□□□□□ -0.9
DDX41-204ENST00000504807 CACFD1Q9UGQ2 172 aa9.4□□□□□ -0.9
DDX41-204ENST00000504807 IGHV4-4A0A075B6R2 117 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 TRAV8-2A0A0B4J237 113 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 PRM2P04554 102 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 S100A5P33763 92 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
DDX41-204ENST00000504807 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 C1orf158Q8N1D5 194 aa9.39□□□□□ -0.91
DDX41-204ENST00000504807 A0A0J9YX75 114 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 SNRPGP15A8MWD9 76 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 PSMB3P49720 205 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 RAB11AP62491 216 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 C1orf194Q5T5A4 169 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 FOXI2Q6ZQN5 318 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 DOK5Q9P104 306 aa9.38□□□□□ -0.91
DDX41-204ENST00000504807 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
DDX41-204ENST00000504807 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 ZNF98A6NK75 572 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 OR4E1P0C645 316 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 ORM2P19652 201 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 ARL16Q0P5N6 197 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 RNF182Q8N6D2 247 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 OR4B1Q8NGF8 309 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 DEDD2Q8WXF8 326 aa9.37□□□□□ -0.91
DDX41-204ENST00000504807 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 DEFB131BA0A096LNP1 70 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 A8MTW9 85 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 C11orf94C9JXX5 98 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 H3BRN7 92 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 ZNF701M0R085 212 aaPredicted RBP9.36□□□□□ -0.91
DDX41-204ENST00000504807 PLA2G10O15496 165 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 SSSCA1O60232 199 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 MED6O75586 246 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 IL7P13232 177 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 EMP1P54849 157 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 SPANXN2Q5MJ10 180 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 RSG1Q9BU20 258 aa9.36□□□□□ -0.91
DDX41-204ENST00000504807 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
DDX41-204ENST00000504807 ISLRO14498 428 aa9.35□□□□□ -0.91
DDX41-204ENST00000504807 RTL8CO15255 209 aa9.35□□□□□ -0.91
DDX41-204ENST00000504807 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
DDX41-204ENST00000504807 NUP62P37198 522 aaPredicted RBP9.35□□□□□ -0.91
DDX41-204ENST00000504807 RRAS2P62070 204 aaPredicted RBP9.35□□□□□ -0.91
DDX41-204ENST00000504807 AKR1C1Q04828 323 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms