RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TEP1Q99973 2627 aaKnown RBP7.99□□□□□ -1.13
TPM3-217ENST00000504663 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
TPM3-217ENST00000504663 DNAJC4Q9NNZ3 241 aa7.99□□□□□ -1.13
TPM3-217ENST00000504663 RAB19A4D1S5 217 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 I3L521 148 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 CD5P06127 495 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 RD3LP0DJH9 198 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 ARL14EPLP0DKL9 152 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 GP9P14770 177 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 PROK1P58294 105 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 LYZP61626 148 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 RHOBP62745 196 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 FAM78BQ5VT40 261 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 TEX38Q6PEX7 206 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 TOMM20LQ6UXN7 152 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 KLHDC1Q8N7A1 406 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 OR4X2Q8NGF9 303 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 OR1L4Q8NGR5 311 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 MARC2Q969Z3 335 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 C17orf77Q96MU5 243 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 PFDN5Q99471 154 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 C19orf24Q9BVV8 132 aa7.98□□□□□ -1.13
TPM3-217ENST00000504663 TECRQ9NZ01 308 aaKnown RBP7.98□□□□□ -1.13
TPM3-217ENST00000504663 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
TPM3-217ENST00000504663 LOC102723971A0A1B0GUV8 181 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 NUDT19A8MXV4 375 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 COX7A2P2O60397 106 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 HYPMO75409 117 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 IL4P05112 153 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 LGALS1P09382 135 aaKnown RBP7.97□□□□□ -1.13
TPM3-217ENST00000504663 ARL3P36405 182 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 KRTAP10-3P60369 221 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 SLC35B1P78383 322 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 ICAM4Q14773 271 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 TOR2AQ5JU69 321 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 C10orf113Q5VZT2 155 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 UNQ9165/PRO28630Q6UXU0 137 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 LINC00305Q7Z4B0 112 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 OR1B1Q8NGR6 318 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 FXYD5Q96DB9 178 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 UBE2E2Q96LR5 201 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 SLC25A39Q9BZJ4 359 aaPredicted RBP7.97□□□□□ -1.13
TPM3-217ENST00000504663 U3KQE9 123 aa7.97□□□□□ -1.13
TPM3-217ENST00000504663 ELOA3CA0A087WX78 387 aaPredicted RBP7.96□□□□□ -1.14
TPM3-217ENST00000504663 IGHV3-35A0A0C4DH35 117 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 A0A0G2JLM5 398 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 NUPL2O15504 423 aaKnown RBP7.96□□□□□ -1.14
TPM3-217ENST00000504663 TCF21O43680 179 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 HBE1P02100 147 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 C8orf88P0DMB2 117 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 ADCYAP1P18509 176 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 ORM2P19652 201 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 GCHFRP30047 84 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 COMMD1Q8N668 190 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 OR5AU1Q8NGC0 362 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 JMJD8Q96S16 334 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 RNF2Q99496 336 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 RARRES2Q99969 163 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 TMEM231Q9H6L2 316 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 GAR1Q9NY12 217 aaKnown RBP7.96□□□□□ -1.14
TPM3-217ENST00000504663 HIGD1AQ9Y241 93 aa7.96□□□□□ -1.14
TPM3-217ENST00000504663 IGHV4OR15-8A0A075B7B6 117 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 IGHV3OR16-8A0A075B7F1 116 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 A0A087WW49 117 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 ADARB2-AS1A8MUL3 147 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 FABP1P07148 127 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 PYYP10082 97 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 BCL2P10415 239 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 CD28P10747 220 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 EDN2P20800 178 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 GUK1Q16774 197 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 LEMD1Q68G75 181 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 Q8WTZ3 238 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 OR5B12Q96R08 314 aa7.95□□□□□ -1.14
TPM3-217ENST00000504663 PEF1Q9UBV8 284 aaKnown RBP7.95□□□□□ -1.14
TPM3-217ENST00000504663 YTHDF2Q9Y5A9 579 aaKnown RBP7.95□□□□□ -1.14
TPM3-217ENST00000504663 A0A1W2PPV4 95 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 RBFOX3A6NFN3 312 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 NDUFA4O00483 81 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 CXorf1O96002 111 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 APOHP02749 345 aaPredicted RBP7.94□□□□□ -1.14
TPM3-217ENST00000504663 IGLC2P0DOY2 106 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 MYCNOSP40205 109 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 CDX1P47902 265 aaPredicted RBP7.94□□□□□ -1.14
TPM3-217ENST00000504663 CD81P60033 236 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 KHDC3LQ587J8 217 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 FAM209BQ5JX69 171 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 UQCC3Q6UW78 93 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 LINC00052Q96N35 136 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 PBDC1Q9BVG4 233 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 GNG13Q9P2W3 67 aa7.94□□□□□ -1.14
TPM3-217ENST00000504663 SETD2Q9BYW2 2564 aaPredicted RBP7.94□□□□□ -1.14
TPM3-217ENST00000504663 ZNF98A6NK75 572 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 FAM74A7A6NL05 159 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms