RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 H3BRN7 92 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 HIST1H1EP10412 219 aaKnown RBP17.67■□□□□ 0.42
PCDH1-204ENST00000503492 TCL1AP56279 114 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 FAM168AQ92567 244 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 ATG101Q9BSB4 218 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 C1RLQ9NZP8 487 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 WI2-2373I1.2A0A1W2PRP0 233 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 NDUFB8O95169 186 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 IL4P05112 153 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 BRS3P32247 399 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 IER3P46695 156 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 ZNF48Q96MX3 618 aaPredicted RBP17.66■□□□□ 0.42
PCDH1-204ENST00000503492 HSPB9Q9BQS6 159 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 C7orf69Q9H7B7 122 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 POLR3KQ9Y2Y1 108 aaPredicted RBP17.66■□□□□ 0.42
PCDH1-204ENST00000503492 ASH1LQ9NR48 2969 aaKnown RBP17.66■□□□□ 0.42
PCDH1-204ENST00000503492 TRAV30A0A087WSZ9 112 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 SMIM27A0A1W2PRY6 76 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 NPFFO15130 113 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 SPINK4O60575 86 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 CA1P00915 261 aaPredicted RBP17.66■□□□□ 0.42
PCDH1-204ENST00000503492 FAM231DQ6ZW35 169 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 TMEM68Q96MH6 324 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 CCL19Q99731 98 aa17.66■□□□□ 0.42
PCDH1-204ENST00000503492 SPTAN1Q13813 2472 aaKnown RBP17.65■□□□□ 0.42
PCDH1-204ENST00000503492 CENPVL3A0A0U1RRI6 287 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 HLA-DRB1P01911 266 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 RNF224P0DH78 156 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 MRPL18Q9H0U6 180 aaKnown RBP17.65■□□□□ 0.42
PCDH1-204ENST00000503492 CSMD1Q96PZ7 3565 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 OR2J3O76001 311 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 TCRAP04437 139 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 BCL6BQ8N143 479 aaPredicted RBP17.65■□□□□ 0.42
PCDH1-204ENST00000503492 NUDT10Q8NFP7 164 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 NUDT11Q96G61 164 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 C21orf62Q9NYP8 219 aa17.65■□□□□ 0.42
PCDH1-204ENST00000503492 CFAP46Q8IYW2 2715 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 SLC35B1P78383 322 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 Q56UQ5 140 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 OTORQ9NRC9 128 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 A0A1B0GUS0 222 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 IGHV3-23P01764 117 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 USF2Q15853 346 aaPredicted RBP17.64■□□□□ 0.41
PCDH1-204ENST00000503492 PRR27Q6MZM9 219 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 MBD6Q96DN6 1003 aa17.64■□□□□ 0.41
PCDH1-204ENST00000503492 IGHV4-61A0A0C4DH41 118 aa17.63■□□□□ 0.41
PCDH1-204ENST00000503492 SNURFLB1AK76 121 aa17.63■□□□□ 0.41
PCDH1-204ENST00000503492 EXOC3-AS1Q8N2X6 119 aa17.63■□□□□ 0.41
PCDH1-204ENST00000503492 GPR82Q96P67 336 aa17.63■□□□□ 0.41
PCDH1-204ENST00000503492 PIMREGQ9BSJ6 248 aa17.63■□□□□ 0.41
PCDH1-204ENST00000503492 THYN1Q9P016 225 aa17.63■□□□□ 0.41
PCDH1-204ENST00000503492 GATCO43716 136 aaKnown RBP17.62■□□□□ 0.41
PCDH1-204ENST00000503492 GOSR1O95249 250 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 PAX8Q06710 450 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 BPIFA4PQ86YQ2 179 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 C17orf77Q96MU5 243 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 MLST8Q9BVC4 326 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 GNB1LQ9BYB4 327 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 ABCA2Q9BZC7 2435 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 FCGR2BP31994 310 aaPredicted RBP17.62■□□□□ 0.41
PCDH1-204ENST00000503492 FMC1Q96HJ9 113 aa17.62■□□□□ 0.41
PCDH1-204ENST00000503492 TRBV9A0A0B4J1U6 114 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 IGLC2P0DOY2 106 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 C10orf105Q8TEF2 133 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 SMIM12Q96EX1 92 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 IGSF10Q6WRI0 2623 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 TRBV19A0A075B6N1 114 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 MRPS12O15235 138 aaKnown RBP17.61■□□□□ 0.41
PCDH1-204ENST00000503492 TMEM256Q8N2U0 113 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 FBXL7Q9UJT9 491 aa17.61■□□□□ 0.41
PCDH1-204ENST00000503492 SVEP1Q4LDE5 3571 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 GRIFINA4D1Z8 144 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 LTAP01374 205 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 OR4F17Q8NGA8 305 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 IGHV3OR16-10A0A075B7F0 116 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 IZUMO1RA6ND01 250 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 MRPL54Q6P161 138 aaKnown RBP17.6■□□□□ 0.41
PCDH1-204ENST00000503492 TMEM136Q6ZRR5 245 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 GBGT1Q8N5D6 347 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 GRAMD2BQ96HH9 432 aa17.6■□□□□ 0.41
PCDH1-204ENST00000503492 OR2T8A6NH00 312 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 ATP6V0E1O15342 81 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 RPL19P84098 196 aaKnown RBP17.59■□□□□ 0.41
PCDH1-204ENST00000503492 FAM110DQ8TAY7 271 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-204ENST00000503492 TMUB1Q9BVT8 246 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 ACACBO00763 2458 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 SH2D7A6NKC9 451 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-204ENST00000503492 VWC2LB2RUY7 222 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 NUPR1O60356 82 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 ECSCRQ19T08 205 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 UNQ5815/PRO19632Q6UWF5 114 aa17.59■□□□□ 0.41
PCDH1-204ENST00000503492 LINC00322Q6ZN03 302 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-204ENST00000503492 CMTM2Q8TAZ6 248 aa17.58■□□□□ 0.41
PCDH1-204ENST00000503492 TP53TG3Q9ULZ0 132 aa17.58■□□□□ 0.41
PCDH1-204ENST00000503492 RNF24Q9Y225 148 aa17.58■□□□□ 0.41
PCDH1-204ENST00000503492 TRAV8-1A0A0A6YYK1 113 aa17.58■□□□□ 0.4
PCDH1-204ENST00000503492 CTSGP08311 255 aa17.58■□□□□ 0.4
PCDH1-204ENST00000503492 WDR73Q6P4I2 378 aa17.58■□□□□ 0.4
PCDH1-204ENST00000503492 SIGLEC15Q6ZMC9 328 aa17.58■□□□□ 0.4
PCDH1-204ENST00000503492 TMEM18Q96B42 140 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms