RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TMEM8BA6NDV4 472 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 M0R1W7 72 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 HIST1H1EP10412 219 aaKnown RBP9.25□□□□□ -0.93
USP46-204ENST00000503060 NPPCP23582 126 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 GCHFRP30047 84 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 GPR6P46095 362 aaPredicted RBP9.25□□□□□ -0.93
USP46-204ENST00000503060 RPL27AP46776 148 aaKnown RBP9.25□□□□□ -0.93
USP46-204ENST00000503060 ATP5G3P48201 142 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 ELOBQ15370 118 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 OR11H6Q8NGC7 330 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 OR2T6Q8NHC8 308 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 PEMTQ9UBM1 199 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 SIGLEC9Q9Y336 463 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 IGHV2-70DA0A0C4DH43 119 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 IGLC7A0M8Q6 106 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 C19orf84I3L1E1 186 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 K7EN84 100 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 GAGE5Q13069 117 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 GAGE6Q13070 117 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 ADIRFQ15847 76 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 TPTE2P1Q5T6R2 138 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 ACY3Q96HD9 319 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 TXNDC17Q9BRA2 123 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 FNDC4Q9H6D8 234 aaPredicted RBP9.25□□□□□ -0.93
USP46-204ENST00000503060 TMEM242Q9NWH2 141 aa9.25□□□□□ -0.93
USP46-204ENST00000503060 REG1AP05451 166 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
USP46-204ENST00000503060 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
USP46-204ENST00000503060 GNB1P62873 340 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 MIR17HGQ75NE6 70 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 MRPL41Q8IXM3 137 aaKnown RBP9.24□□□□□ -0.93
USP46-204ENST00000503060 Q8WTZ3 238 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 RELNP78509 3460 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 NDUFS7O75251 213 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 FOXH1O75593 365 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 PRTN3P24158 256 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 HTR1DP28221 377 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 RND2P52198 227 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 RNF5Q99942 180 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 DPM3Q9P2X0 92 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 CACNA1AO00555 2505 aa9.24□□□□□ -0.93
USP46-204ENST00000503060 CXCL1P09341 107 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 PVRIGQ6DKI7 326 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 HCP5Q6MZN7 132 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 PPP1R27Q86WC6 154 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 OR51G1Q8NGK1 321 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 C16orf92Q96LL3 132 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 C19orf24Q9BVV8 132 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 YTHDF2Q9Y5A9 579 aaKnown RBP9.23□□□□□ -0.93
USP46-204ENST00000503060 ITPR1Q14643 2758 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 SPTBN1Q01082 2364 aaKnown RBP9.23□□□□□ -0.93
USP46-204ENST00000503060 TRAV30A0A087WSZ9 112 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 ODF3BA8MYP8 253 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 TIMM23O14925 209 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 OR5G3P0C626 314 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 PAX2Q02962 417 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 KLRD1Q13241 179 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 C1QL4Q86Z23 238 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 C20orf144Q9BQM9 153 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 FBXL15Q9H469 300 aa9.23□□□□□ -0.93
USP46-204ENST00000503060 HRNRQ86YZ3 2850 aaPredicted RBP9.22□□□□□ -0.93
USP46-204ENST00000503060 J3QLI3 93 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 AMBPP02760 352 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
USP46-204ENST00000503060 EFNA4P52798 201 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 THAP8Q8NA92 274 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 NPIPB3Q92617 1050 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 TECRQ9NZ01 308 aaKnown RBP9.22□□□□□ -0.93
USP46-204ENST00000503060 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 NDUFB4O95168 129 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 MFAP2P55001 183 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 C16orf82Q7Z2V1 217 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 KIR3DL3Q8N743 410 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 MRPL36Q9P0J6 103 aaKnown RBP9.22□□□□□ -0.93
USP46-204ENST00000503060 DOK5Q9P104 306 aa9.22□□□□□ -0.93
USP46-204ENST00000503060 IGKV1D-37A0A075B6S9 117 aa9.21□□□□□ -0.93
USP46-204ENST00000503060 IGHV3-48P01763 117 aa9.21□□□□□ -0.93
USP46-204ENST00000503060 HILPDAQ9Y5L2 63 aa9.21□□□□□ -0.93
USP46-204ENST00000503060 NAV3Q8IVL0 2385 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 ARHGAP32A7KAX9 2087 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 TCRBV4S1A1TA0A5B7 111 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 FCN1O00602 326 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 OR7C2O60412 319 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 IGHG4P01861 327 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 APELAP0DMC3 54 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.94
USP46-204ENST00000503060 FAM3BP58499 235 aaPredicted RBP9.21□□□□□ -0.94
USP46-204ENST00000503060 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 TMEM37Q8WXS4 190 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 DERL1Q9BUN8 251 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 MRPL32Q9BYC8 188 aaKnown RBP9.21□□□□□ -0.94
USP46-204ENST00000503060 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
USP46-204ENST00000503060 SCO2A0A1W2PP80 73 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 TAS2R45P59539 299 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 PLGLAQ15195 96 aa9.2□□□□□ -0.94
USP46-204ENST00000503060 PQLC2Q6ZP29 291 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms