RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 QRFPP83859 136 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 C12orf74Q32Q52 190 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 ZNF833PQ6ZTB9 187 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 Q8IYB0 196 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 ATOH7Q8N100 152 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 ZNF431Q8TF32 576 aaPredicted RBP-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 C8orf76Q96K31 380 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 C2orf50Q96LR7 162 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 LINC00467Q9BRT7 94 aa-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 TPRP12270 2363 aaKnown RBP-0.12□□□□□ -2.43
SMAD1-203ENST00000502342 ARHGEF11O15085 1522 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 hCG_1818297A0A087WSY0 165 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 FAM236DA0A1B0GTK5 79 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 A8MT66 165 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 PPYP01298 95 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 FAM236CP0DP71 79 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 SRP14P37108 136 aaKnown RBP-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 AP3S2P59780 193 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 EIF5AP63241 154 aaKnown RBP-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 SPATA45Q537H7 98 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 CT55Q8WUE5 264 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 TET1Q8NFU7 2136 aa-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.13□□□□□ -2.43
SMAD1-203ENST00000502342 MAP3K5Q99683 1374 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 TRAV23DV6A0A075B6W5 121 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 JMJD7-PLA2G4BH0Y9G9 81 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 ERC2-IT1O76042 136 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 IFNA5P01569 189 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 TTRP02766 147 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 IFNA16P05015 189 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 COX7CP15954 63 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 PPIBP23284 216 aaKnown RBP-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 DEFA3P59666 94 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 MAGOHP61326 146 aaKnown RBP-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 OR6V1Q8N148 313 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 SLC25A40Q8TBP6 338 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 CFAP53Q96M91 514 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 VPS29Q9UBQ0 182 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 LY96Q9Y6Y9 160 aa-0.14□□□□□ -2.43
SMAD1-203ENST00000502342 TRGV10A0A0A0MS01 117 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 hADV38S2A0JD32 116 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 CLDN24A6NM45 220 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 NDUFB3O43676 98 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 CNIH1O95406 144 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 CXCL8P10145 99 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 RNASE4P34096 147 aaKnown RBP-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 LYRM7Q5U5X0 104 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 Q86TA4 180 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 CLDN22Q8N7P3 220 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 LYSMD1Q96S90 227 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 SLC25A21Q9BQT8 299 aaPredicted RBP-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 LLPHQ9BRT6 129 aaKnown RBP-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 TVP23BQ9NYZ1 205 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 NOSIPQ9Y314 301 aaKnown RBP-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 RNF11Q9Y3C5 154 aa-0.15□□□□□ -2.43
SMAD1-203ENST00000502342 RTL1A6NKG5 1358 aa-0.16□□□□□ -2.43
SMAD1-203ENST00000502342 HRNRQ86YZ3 2850 aaPredicted RBP-0.16□□□□□ -2.43
SMAD1-203ENST00000502342 A8MWV9 139 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 E7EUB6 86 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 M0R036 132 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 SERPINA6P08185 405 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 CD14P08571 375 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 NKX2-5P52952 324 aaPredicted RBP-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 DSCR4P56555 118 aaPredicted RBP-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 KRR1Q13601 381 aaKnown RBP-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 GLIPR1L1Q6UWM5 242 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 PDZD9Q8IXQ8 264 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 PXT1Q8NFP0 134 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 OR10K1Q8NGX5 313 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 Q8TAT8 98 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 BORCS7Q96B45 105 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 ZC2HC1AQ96GY0 325 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 PBOV1Q9GZY1 135 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 UCK1Q9HA47 277 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 OPTCQ9UBM4 332 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 KNTC1P50748 2209 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 ZGRF1Q86YA3 2104 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 OBSL1O75147 1896 aa-0.16□□□□□ -2.44
SMAD1-203ENST00000502342 LRP1Q07954 4544 aaKnown RBP-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 SCN8AQ9UQD0 1980 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 ZNF727A8MUV8 499 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 BCL9O00512 1426 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 CD3DP04234 171 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 C8GP07360 202 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 SRIP30626 198 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 ROMO1P60602 79 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 CDK6Q00534 326 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 MYL5Q02045 173 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 COTL1Q14019 142 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 Q6Q795 121 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 MUCL1Q96DR8 90 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 YPEL2Q96QA6 119 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 GGACTQ9BVM4 153 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 OR52A1Q9UKL2 312 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 LOC285556D6RIA3 1793 aa-0.17□□□□□ -2.44
SMAD1-203ENST00000502342 M0R233 179 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 CETN3O15182 167 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 CCL4P13236 92 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 IAH1Q2TAA2 248 aaPredicted RBP-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms