RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 SPATA3Q8NHX4 192 aa14.87□□□□□ -0.03
LINC01550-201ENST00000499006 DOK5Q9P104 306 aa14.87□□□□□ -0.03
LINC01550-201ENST00000499006 PEMTQ9UBM1 199 aa14.87□□□□□ -0.03
LINC01550-201ENST00000499006 RABAC1Q9UI14 185 aa14.87□□□□□ -0.03
LINC01550-201ENST00000499006 U3KQE9 123 aa14.87□□□□□ -0.03
LINC01550-201ENST00000499006 ELOA3CA0A087WX78 387 aaPredicted RBP14.86□□□□□ -0.03
LINC01550-201ENST00000499006 C2orf70A6NJV1 201 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 SEC11BP0C7V7 166 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 C8orf88P0DMB2 117 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 EDN2P20800 178 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 GCSAMLQ5JQS6 135 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 METTL26Q96S19 204 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 DNAJC4Q9NNZ3 241 aa14.86□□□□□ -0.03
LINC01550-201ENST00000499006 CMYA5Q8N3K9 4069 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 NPPCP23582 126 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 ADAMTSL5Q6ZMM2 481 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 OR1L4Q8NGR5 311 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 PFDN5Q99471 154 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 VSIRQ9H7M9 311 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 HIGD1AQ9Y241 93 aa14.85□□□□□ -0.03
LINC01550-201ENST00000499006 IGHV7-4-1A0A0J9YVY3 117 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 COX7A2P2O60397 106 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 APOHP02749 345 aaPredicted RBP14.84□□□□□ -0.03
LINC01550-201ENST00000499006 CSN3P07498 182 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 OR5G3P0C626 314 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 M6PRP20645 277 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 CBLN1P23435 193 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 WFDC9Q8NEX5 89 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 GATAD1Q8WUU5 269 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 UHRF2Q96PU4 802 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 PLA2G2EQ9NZK7 142 aa14.84□□□□□ -0.03
LINC01550-201ENST00000499006 ACOT6Q3I5F7 207 aaPredicted RBP14.83□□□□□ -0.03
LINC01550-201ENST00000499006 C10orf113Q5VZT2 155 aa14.83□□□□□ -0.03
LINC01550-201ENST00000499006 TMED6Q8WW62 240 aa14.83□□□□□ -0.03
LINC01550-201ENST00000499006 SLC25A39Q9BZJ4 359 aaPredicted RBP14.83□□□□□ -0.03
LINC01550-201ENST00000499006 SIGLEC8Q9NYZ4 499 aa14.83□□□□□ -0.03
LINC01550-201ENST00000499006 SMPXQ9UHP9 88 aa14.83□□□□□ -0.03
LINC01550-201ENST00000499006 H3BRN7 92 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 BUB3O43684 328 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 MBP02144 154 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 FOLR2P14207 255 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 LINC00305Q7Z4B0 112 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 MARC2Q969Z3 335 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 PKD1L1Q8TDX9 2849 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 IGHV3-49A0A0A0MS15 119 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 CHEK1O14757 476 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 RAB2AP61019 212 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 TMEM41BQ5BJD5 291 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 MORN5Q5VZ52 161 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 PHYHIPLQ96FC7 376 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 SHANK2-AS3Q9BTD1 123 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 SEPSECSQ9HD40 501 aaKnown RBP14.82□□□□□ -0.04
LINC01550-201ENST00000499006 RPRMQ9NS64 109 aa14.82□□□□□ -0.04
LINC01550-201ENST00000499006 ZNF98A6NK75 572 aa14.81□□□□□ -0.04
LINC01550-201ENST00000499006 EIF5AL1Q6IS14 154 aaKnown RBP14.81□□□□□ -0.04
LINC01550-201ENST00000499006 RPP25LQ8N5L8 163 aaKnown RBP14.81□□□□□ -0.04
LINC01550-201ENST00000499006 OR10G4Q8NGN3 311 aa14.81□□□□□ -0.04
LINC01550-201ENST00000499006 OR10G9Q8NGN4 311 aa14.81□□□□□ -0.04
LINC01550-201ENST00000499006 OR10G7Q8NGN6 311 aa14.81□□□□□ -0.04
LINC01550-201ENST00000499006 ELOVL1Q9BW60 279 aa14.81□□□□□ -0.04
LINC01550-201ENST00000499006 RHPN1-AS1Q9BWJ2 59 aa14.81□□□□□ -0.04
LINC01550-201ENST00000499006 IGHV3OR16-13A0A075B7E8 117 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 IGHV3-74A0A0B4J1X5 117 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 A0A1W2PS18 150 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 CD33P20138 364 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 S100A7P31151 101 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 AKR1C8PQ5T2L2 129 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 FAM78BQ5VT40 261 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 S100A7AQ86SG5 101 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 RNF2Q99496 336 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 SCRT1Q9BWW7 348 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 MLXQ9UH92 298 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 PFDN2Q9UHV9 154 aa14.8□□□□□ -0.04
LINC01550-201ENST00000499006 IGHV3-66A0A0C4DH42 116 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 SEC14L6B5MCN3 397 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 UMAD1C9J7I0 102 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 C1orf194Q5T5A4 169 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 SPATA31B1PQ5VZV4 182 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 LEMD1Q68G75 181 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 C16orf54Q6UWD8 224 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 NARS2Q96I59 477 aaKnown RBP14.79□□□□□ -0.04
LINC01550-201ENST00000499006 MRPL32Q9BYC8 188 aaKnown RBP14.79□□□□□ -0.04
LINC01550-201ENST00000499006 TECRQ9NZ01 308 aaKnown RBP14.79□□□□□ -0.04
LINC01550-201ENST00000499006 FUT9Q9Y231 359 aa14.79□□□□□ -0.04
LINC01550-201ENST00000499006 RHOBP62745 196 aa14.78□□□□□ -0.04
LINC01550-201ENST00000499006 MIR17HGQ75NE6 70 aa14.78□□□□□ -0.04
LINC01550-201ENST00000499006 GLMPQ8WWB7 406 aa14.78□□□□□ -0.04
LINC01550-201ENST00000499006 BMI1P35226 326 aa14.77□□□□□ -0.04
LINC01550-201ENST00000499006 SULT1A2P50226 295 aa14.77□□□□□ -0.04
LINC01550-201ENST00000499006 FAM122CQ6P4D5 195 aa14.77□□□□□ -0.04
LINC01550-201ENST00000499006 ALKAL2Q6UX46 152 aa14.77□□□□□ -0.04
LINC01550-201ENST00000499006 TMEM231Q9H6L2 316 aa14.77□□□□□ -0.04
LINC01550-201ENST00000499006 TRAV5A0A0B4J249 113 aa14.76□□□□□ -0.05
LINC01550-201ENST00000499006 SAP30O75446 220 aa14.76□□□□□ -0.05
LINC01550-201ENST00000499006 CDC34P49427 236 aaPredicted RBP14.76□□□□□ -0.05
LINC01550-201ENST00000499006 ZNF726P1Q15940 193 aa14.76□□□□□ -0.05
LINC01550-201ENST00000499006 PRR31Q5SQ13 230 aa14.76□□□□□ -0.05
LINC01550-201ENST00000499006 FAM90A2PQ658T7 463 aa14.76□□□□□ -0.05
LINC01550-201ENST00000499006 TEX261Q6UWH6 196 aa14.76□□□□□ -0.05
LINC01550-201ENST00000499006 GRAMD2BQ96HH9 432 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms