RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ADAM5Q6NVV9 412 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 DLK2Q6UY11 383 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C15orf53Q8NAA6 179 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 IL1F10Q8WWZ1 152 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TMEM37Q8WXS4 190 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ISOC2Q96AB3 205 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 YPEL4Q96NS1 127 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ODF3Q96PU9 254 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 GPHA2Q96T91 129 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C1orf109Q9NX04 203 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 CTSZQ9UBR2 303 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 TRBV5-3A0A0A0MS03 114 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C2orf70A6NJV1 201 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 J3KRW8 73 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 MUC1P15941 1255 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 PSMA2P25787 234 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 HOXA7P31268 230 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 RND2P52198 227 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ZNF137PP52743 207 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 PSPHP78330 225 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TAF10Q12962 218 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 KIAA0087Q14695 138 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 IDNKQ5T6J7 187 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 SFXN4Q6P4A7 337 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 IGFL3Q6UXB1 125 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ZNF600Q6ZNG1 722 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 VKORC1L1Q8N0U8 176 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 OR5AS1Q8N127 324 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 SLC25A45Q8N413 288 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 OR2M7Q8NG81 312 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 OR10D4PQ8NGN7 298 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 RDH11Q8TC12 318 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 CFHR4Q92496 578 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ABHD14BQ96IU4 210 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C12orf57Q99622 126 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 MRPL57Q9BQC6 102 aaKnown RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 GINS3Q9BRX5 216 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 PRADC1Q9BSG0 188 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 SOX7Q9BT81 388 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FAAP24Q9BTP7 215 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 MAGIXQ9H6Y5 334 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ELOVL3Q9HB03 270 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TXNL4BQ9NX01 149 aaKnown RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 HS3ST2Q9Y278 367 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 RBMX2Q9Y388 322 aaKnown RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 MKI67P46013 3256 aaKnown RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 IGHV1-69DA0A0B4J2H0 117 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 PRR23D1E9PI22 279 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 CCDC188H7C350 402 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 NSA2O95478 260 aaKnown RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 PRR23D2P0DMB1 279 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 IGFBP2P18065 325 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 YBEYP58557 167 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 HBBP68871 147 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 HLA-DRB3P79483 266 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ZNF90Q03938 601 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 DUSP28Q4G0W2 176 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TRIQKQ629K1 86 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TEX38Q6PEX7 206 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TMEM88Q6PEY1 159 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C2orf82Q6UX34 121 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FOXI2Q6ZQN5 318 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 C16orf82Q7Z2V1 217 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 DPPA2Q7Z7J5 298 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.05□□□□□ -2.24
XRN1-214ENST00000498077 NUP35Q8NFH5 326 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 OR10G3Q8NGC4 313 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FLVCR1-AS1Q8TAF5 88 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 AP3S1Q92572 193 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 FAM104AQ969W3 186 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 NEU1Q99519 415 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 TMEM60Q9H2L4 133 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 EFCAB1Q9HAE3 211 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 EMC3Q9P0I2 261 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 ANXA10Q9UJ72 324 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 SSR3Q9UNL2 185 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 PYGO1Q9Y3Y4 419 aa1.05□□□□□ -2.24
XRN1-214ENST00000498077 A0A087WV62 115 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 IQCF6A8MYZ5 107 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ZNF736B4DX44 427 aaPredicted RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 HSPB1P04792 205 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 FGF7P21781 194 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 FUSP35637 526 aaKnown RBP eCLIP1.04□□□□□ -2.24
XRN1-214ENST00000498077 CDX1P47902 265 aaPredicted RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 TDGF1P3P51864 188 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 FGF12P61328 243 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 RPL19P84098 196 aaKnown RBP1.04□□□□□ -2.24
XRN1-214ENST00000498077 CCDC58Q4VC31 144 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CLEC20AQ6ZU45 233 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 Q6ZVQ6 151 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 KCNRGQ8N5I3 272 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ZFAND2AQ8N6M9 145 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ACBD4Q8NC06 268 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 CACNG8Q8WXS5 425 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 ARL11Q969Q4 196 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 POLD4Q9HCU8 107 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 NDUFAF4Q9P032 175 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 RCE1Q9Y256 329 aa1.04□□□□□ -2.24
XRN1-214ENST00000498077 RFNGQ9Y644 331 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms