RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ZNF705FA8MVS1 300 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 IL7P13232 177 aa12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 PPP1R1AQ13522 171 aa12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 OR1S1Q8NH92 325 aa12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 DTD1Q8TEA8 209 aa12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 CELA1Q9UNI1 258 aa12.09□□□□□ -0.47
TRAPPC3-207ENST00000497251 A0A1B0GVY2 172 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 PITX3O75364 302 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 NXPH3O95157 252 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 IFNA21P01568 189 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 PSG1P11464 419 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 GPX4P36969 197 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 OXA1LQ15070 435 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 CNPY1Q3B7I2 92 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 FOXI2Q6ZQN5 318 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 TMEM170AQ8WVE7 144 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 RNF125Q96EQ8 232 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 RBKSQ9H477 322 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 RFNGQ9Y644 331 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 MUC4Q99102 2169 aa12.08□□□□□ -0.48
TRAPPC3-207ENST00000497251 KIAA1109Q2LD37 5005 aa12.07□□□□□ -0.48
TRAPPC3-207ENST00000497251 IFNA10P01566 189 aa12.07□□□□□ -0.48
TRAPPC3-207ENST00000497251 PSMB3P49720 205 aa12.07□□□□□ -0.48
TRAPPC3-207ENST00000497251 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
TRAPPC3-207ENST00000497251 SAV1Q9H4B6 383 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC3-207ENST00000497251 PRSS29PA6NIE9 313 aa12.06□□□□□ -0.48
TRAPPC3-207ENST00000497251 CFDP00746 253 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-207ENST00000497251 BTCP35070 178 aa12.06□□□□□ -0.48
TRAPPC3-207ENST00000497251 RNF212Q495C1 297 aa12.06□□□□□ -0.48
TRAPPC3-207ENST00000497251 SOHLH1Q5JUK2 328 aa12.06□□□□□ -0.48
TRAPPC3-207ENST00000497251 PCLOQ9Y6V0 5065 aa12.06□□□□□ -0.48
TRAPPC3-207ENST00000497251 PKHD1P08F94 4074 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 C9orf170A2RU37 121 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 SNRPGP15A8MWD9 76 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 ISLRO14498 428 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 MED6O75586 246 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 S100A7P31151 101 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 CCDC32Q9BV29 185 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 GOLT1BQ9Y3E0 138 aa12.05□□□□□ -0.48
TRAPPC3-207ENST00000497251 LINC00854A0A1B0GVQ3 168 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 ZFP92A6NM28 416 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 OR4E1P0C645 316 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 MEOX2P50222 304 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 PAX9P55771 341 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 COQ8AQ8NI60 647 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 SLC35E1Q96K37 410 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 CIB3Q96Q77 187 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 NIPSNAP3BQ9BS92 247 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
TRAPPC3-207ENST00000497251 HOXB5P09067 269 aa12.03□□□□□ -0.48
TRAPPC3-207ENST00000497251 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
TRAPPC3-207ENST00000497251 EBLN2Q6P2I7 272 aa12.03□□□□□ -0.48
TRAPPC3-207ENST00000497251 SLC45A2Q9UMX9 530 aa12.03□□□□□ -0.48
TRAPPC3-207ENST00000497251 FLVCR2Q9UPI3 526 aa12.03□□□□□ -0.48
TRAPPC3-207ENST00000497251 RTL8CO15255 209 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 PLA2G10O15496 165 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 LYRM1O43325 122 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 HBE1P02100 147 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 RAB11AP62491 216 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 PSG9Q00887 426 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 GAMTQ14353 236 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 ZNF767PQ75MW2 155 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 UBE2DNLQ8IWF7 75 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 S100ZQ8WXG8 99 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 TRGV9Q99603 122 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 PBDC1Q9BVG4 233 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 FAT2Q9NYQ8 4349 aa12.02□□□□□ -0.49
TRAPPC3-207ENST00000497251 A6NHS1 94 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 SOCS3O14543 225 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 SYNGR2O43760 224 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 B2MP61769 119 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 RPP30P78346 268 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 C4orf46Q504U0 113 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 Q6ZR54 194 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 OR8I2Q8N0Y5 310 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 RPRMQ9NS64 109 aa12.01□□□□□ -0.49
TRAPPC3-207ENST00000497251 IAPPP10997 89 aa12□□□□□ -0.49
TRAPPC3-207ENST00000497251 EMP1P54849 157 aa12□□□□□ -0.49
TRAPPC3-207ENST00000497251 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
TRAPPC3-207ENST00000497251 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
TRAPPC3-207ENST00000497251 WDR12Q9GZL7 423 aaKnown RBP12□□□□□ -0.49
TRAPPC3-207ENST00000497251 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
TRAPPC3-207ENST00000497251 DNAH2Q9P225 4427 aa12□□□□□ -0.49
TRAPPC3-207ENST00000497251 DNAH17Q9UFH2 4485 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 ADAP1O75689 374 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 GALR1P47211 349 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 ID3Q02535 119 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 RRN3P1Q2M238 152 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 GDF5OSQ5U4N7 250 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 C15orf53Q8NAA6 179 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 OR4D5Q8NGN0 318 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 MITD1Q8WV92 249 aa11.99□□□□□ -0.49
TRAPPC3-207ENST00000497251 PPP1R14BQ96C90 147 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms