RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 GLIPR1L1Q6UWM5 242 aa2□□□□□ -2.09
VPS36-206ENST00000497149 LCA10Q71F78 164 aa2□□□□□ -2.09
VPS36-206ENST00000497149 SSX8Q7RTT4 187 aa2□□□□□ -2.09
VPS36-206ENST00000497149 LINC00305Q7Z4B0 112 aa2□□□□□ -2.09
VPS36-206ENST00000497149 TRAPPC6BQ86SZ2 158 aa2□□□□□ -2.09
VPS36-206ENST00000497149 LHFPL1Q86WI0 220 aa2□□□□□ -2.09
VPS36-206ENST00000497149 C4orf33Q8N1A6 199 aa2□□□□□ -2.09
VPS36-206ENST00000497149 C10orf126Q8N4M7 172 aa2□□□□□ -2.09
VPS36-206ENST00000497149 LMX1AQ8TE12 382 aa2□□□□□ -2.09
VPS36-206ENST00000497149 COPS9Q8WXC6 57 aa2□□□□□ -2.09
VPS36-206ENST00000497149 CARD19Q96LW7 228 aa2□□□□□ -2.09
VPS36-206ENST00000497149 C20orf166-AS1Q96NR2 134 aa2□□□□□ -2.09
VPS36-206ENST00000497149 YPEL2Q96QA6 119 aa2□□□□□ -2.09
VPS36-206ENST00000497149 TAS2R8Q9NYW2 309 aa2□□□□□ -2.09
VPS36-206ENST00000497149 BOKQ9UMX3 212 aaPredicted RBP2□□□□□ -2.09
VPS36-206ENST00000497149 COQ4Q9Y3A0 265 aa2□□□□□ -2.09
VPS36-206ENST00000497149 IER3IP1Q9Y5U9 82 aa2□□□□□ -2.09
VPS36-206ENST00000497149 ARHGEF11O15085 1522 aa2□□□□□ -2.09
VPS36-206ENST00000497149 FBN1P35555 2871 aaKnown RBP2□□□□□ -2.09
VPS36-206ENST00000497149 EML6Q6ZMW3 1958 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 NUP210Q8TEM1 1887 aaPredicted RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 MYO16Q9Y6X6 1858 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 TRBV7-6A0A0J9YX20 115 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 LINC00862A6NCI5 91 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 A8MWV9 139 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 C9JCJ5 164 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 G3V3Q6 166 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 H7BYZ3 331 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 NDUFB3O43676 98 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 PRM2P04554 102 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 ZNF728P0DKX0 622 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 FABP2P12104 132 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 CRYGSP22914 178 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BOP23527 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 PSMB8P28062 276 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BBP33778 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 RPL22P35268 128 aaKnown RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 ZNF93P35789 620 aaPredicted RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BDP58876 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 TPPP2P59282 170 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 LSM3P62310 102 aaKnown RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BCP62807 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 RPL30P62888 115 aaKnown RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 BTG2P78543 158 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 CCL20P78556 96 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 RHOGP84095 191 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 HSD52Q0P140 79 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST2H2BEQ16778 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 CCSMST1Q4G0I0 132 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 TMEM14EPQ6UXP3 125 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 SNX29P2Q8IUI4 249 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 H1FXQ92522 213 aaKnown RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BHQ93079 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 ERMAPQ96PL5 475 aaPredicted RBP1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BNQ99877 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 HIST1H2BMQ99879 126 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 MIEN1Q9BRT3 115 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 GINS4Q9BRT9 223 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 TMEM133Q9H2Q1 129 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 OTORQ9NRC9 128 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 CBLN4Q9NTU7 201 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 ANAPC1Q9H1A4 1944 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 TECPR2O15040 1411 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 NSD3Q9BZ95 1437 aa1.99□□□□□ -2.09
VPS36-206ENST00000497149 TMEM2Q9UHN6 1383 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 MYO5BQ9ULV0 1848 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 TTC37Q6PGP7 1564 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 A0A087X0T9 212 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 TRAV13-1A0A0B4J241 112 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 LOC107984640A0A0U1RRK4 108 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 OR2T8A6NH00 312 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 C1orf196B1AJZ1 125 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 I3L521 148 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 PLA2G10O15496 165 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 CSN1S1P47710 185 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 DAPP51397 102 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 FOXA3P55318 350 aaPredicted RBP1.98□□□□□ -2.09
VPS36-206ENST00000497149 RBM11P57052 281 aaKnown RBP1.98□□□□□ -2.09
VPS36-206ENST00000497149 YPEL3P61236 119 aaPredicted RBP1.98□□□□□ -2.09
VPS36-206ENST00000497149 HES1Q14469 280 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 PDGFRLQ15198 375 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 C6orf52Q5T4I8 152 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 NOXRED1Q6NXP6 359 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 AMTNQ6UX39 209 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 GKN2Q86XP6 184 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 GPHB5Q86YW7 130 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 C9orf62Q8N4C0 152 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 TEX29Q8N6K0 151 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 OR5D14Q8NGL3 314 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 OR5C1Q8NGR4 320 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 OR10AC1Q8NH08 325 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 ADAT1Q9BUB4 502 aaKnown RBP1.98□□□□□ -2.09
VPS36-206ENST00000497149 SNHG12Q9BXW3 62 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 SLC39A9Q9NUM3 307 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 MPC1Q9Y5U8 109 aa1.98□□□□□ -2.09
VPS36-206ENST00000497149 DENND4BO75064 1496 aaPredicted RBP1.98□□□□□ -2.09
VPS36-206ENST00000497149 RALGAPA2Q2PPJ7 1873 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms