RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ARL5CA6NH57 179 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 PIRO00625 290 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 CXorf1O96002 111 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 APCSP02743 223 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 MAS1P04201 325 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 IGHV4-34P06331 123 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF688P0C7X2 276 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 COX4I1P13073 169 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF140P52738 457 aaPredicted RBP2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 DNAJB13P59910 316 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 GNA12Q03113 381 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 LOXL1Q08397 574 aaPredicted RBP2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF616Q08AN1 781 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ENDOGQ14249 297 aaKnown RBP2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 OR8B8Q15620 311 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ZFAND6Q6FIF0 208 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ZFP1Q6P2D0 407 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 LINC01551Q86U37 167 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 TMEM256Q8N2U0 113 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 Q8N976 141 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 OR9Q1Q8NGQ5 310 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 RHOXF1Q8NHV9 184 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 TYMSOSQ8TAI1 123 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 CIRBP-AS1Q8TBR5 109 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 FRZBQ92765 325 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 C2orf88Q9BSF0 95 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 GPR84Q9NQS5 396 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 KCNIP2Q9NS61 270 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 FBXL12Q9NXK8 326 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 MED11Q9P086 117 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 RPUSD1Q9UJJ7 312 aaKnown RBP2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ANKRD12Q6UB98 2062 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 TRPM6Q9BX84 2022 aa2.46□□□□□ -2.02
EXOSC3-208ENST00000496910 ANK1P16157 1881 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 FREM3P0C091 2139 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 FAT2Q9NYQ8 4349 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 F8W036 122 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 BPY2O14599 106 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 GSTZ1O43708 216 aaPredicted RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PFDN1O60925 122 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PRB2P02812 416 aaPredicted RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SMIM10L2AP0DMW4 78 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SMIM10L2BP0DMW5 78 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 NPY1RP25929 384 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 G6PCP35575 357 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PPP1CCP36873 323 aaKnown RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SERPINB10P48595 397 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 POLR2HP52434 150 aaKnown RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 CAV1Q03135 178 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 BSPH1Q075Z2 132 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 MMDQ15546 238 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 GRK1Q15835 563 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 IL17AQ16552 155 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 DEFB109BQ30KR1 87 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SP6Q3SY56 376 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF678Q5SXM1 525 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 WDR59Q6PJI9 974 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 Q6ZS49 121 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 GPHB5Q86YW7 130 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 TMEM86AQ8N2M4 240 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SLC22A24Q8N4F4 322 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PACRGLQ8N7B6 248 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 RAB2BQ8WUD1 216 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 RTN4IP1Q8WWV3 396 aaPredicted RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 MBD3L1Q8WWY6 194 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SLC7A6Q92536 515 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 RNASE6Q93091 150 aaKnown RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PHYHIPLQ96FC7 376 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF285Q96NJ3 590 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 TRIB3Q96RU7 358 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 B9D2Q9BPU9 175 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 VPS25Q9BRG1 176 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PYGO2Q9BRQ0 406 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 DOHHQ9BU89 302 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 WDR61Q9GZS3 305 aaKnown RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 PBOV1Q9GZY1 135 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF286AQ9HBT8 521 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 AMMECR1Q9Y4X0 333 aaPredicted RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 DSCAML1Q8TD84 2053 aa2.45□□□□□ -2.02
EXOSC3-208ENST00000496910 CR1P17927 2039 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 TRBV19A0A075B6N1 114 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 TRAV36DV7A0A075B6V5 113 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 IGHV3-49A0A0A0MS15 119 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 IGKV1D-43A0A0B4J1Z2 117 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 IGHV3-64DA0A0J9YX35 117 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 LOC102725191A0A1B0GVB3 256 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 A0A1B0GVY2 172 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 J3KT08 172 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 AIPO00170 330 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 RGS5O15539 181 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 DLEU1O43261 78 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 BANF1O75531 89 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 SCO1O75880 301 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 GADD45GO95257 159 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 APOA2P02652 100 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 RBP1P09455 135 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 CGB3P0DN86 165 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 CGB7P0DN87 165 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms