RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 GPN1Q9HCN4 374 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-215ENST00000496570 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
DNMT3A-215ENST00000496570 FAM24AA6NFZ4 105 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 SOCS3O14543 225 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 DEDDO75618 318 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 CFDP00746 253 aaPredicted RBP11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 NUP62P37198 522 aaPredicted RBP11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 DEFA1P59665 94 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 DEFA3P59666 94 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 CASC10Q5T4H9 136 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 BPIFCQ8NFQ6 507 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 RNF183Q96D59 192 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 NPVFQ9HCQ7 196 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 RYR3Q15413 4870 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 AGRNO00468 2067 aa11.83□□□□□ -0.52
DNMT3A-215ENST00000496570 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 KNCNA6PVL3 124 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 L7N2F9 121 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 GOSR2O14653 212 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 SPRY2O43597 315 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 PLP1P60201 277 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 VAMP2P63027 116 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 CSTL1Q9H114 145 aa11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 SEPSECSQ9HD40 501 aaKnown RBP11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
DNMT3A-215ENST00000496570 IGSF23A1L1A6 192 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 ZNF98A6NK75 572 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 ORM2P19652 201 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 CAV2P51636 162 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 H2BFSP57053 126 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 S100A10P60903 97 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 SLC38A11Q08AI6 406 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 TEPPQ6URK8 271 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 SLC25A32Q9H2D1 315 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 MGAT4CQ9UBM8 478 aa11.81□□□□□ -0.52
DNMT3A-215ENST00000496570 H3BRN7 92 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 CST7O76096 145 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 LINC00869P0C866 280 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 BCAP31P51572 246 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 EWSR1Q01844 656 aaKnown RBP eCLIP11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 VWC2Q2TAL6 325 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 OR1B1Q8NGR6 318 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 MGST2Q99735 147 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 SCRT1Q9BWW7 348 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 NMES1Q9C002 83 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 DOK5Q9P104 306 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 PFDN2Q9UHV9 154 aa11.8□□□□□ -0.52
DNMT3A-215ENST00000496570 H0YIZ8 118 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 AGPAT2O15120 278 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 LYL1P12980 280 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 DEFB1P60022 68 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 SELENOTP62341 195 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 STHQ8IWL8 128 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 TMEM217Q8N7C4 229 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 PPP1R14BQ96C90 147 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 SHANK2-AS3Q9BTD1 123 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 SLC25A39Q9BZJ4 359 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 TENM2Q9NT68 2774 aa11.79□□□□□ -0.52
DNMT3A-215ENST00000496570 PVALBP20472 110 aaPredicted RBP11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 C4BPBP20851 252 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 SULT1A1P50225 295 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 UHRF2Q96PU4 802 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 TMEM147Q9BVK8 224 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 SLC25A22Q9H936 323 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 OR5AC2Q9NZP5 309 aa11.78□□□□□ -0.52
DNMT3A-215ENST00000496570 HYPMO75409 117 aa11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 GDF5OSQ5U4N7 250 aa11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 C20orf173Q96LM9 149 aa11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 HIGD1AQ9Y241 93 aa11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 WDR83OSQ9Y284 106 aa11.77□□□□□ -0.53
DNMT3A-215ENST00000496570 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 H3BMM0 161 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 PSMB3P49720 205 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 ZNF546Q86UE3 836 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 GATAD1Q8WUU5 269 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 LYSTQ99698 3801 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 RSG1Q9BU20 258 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 ARL6Q9H0F7 186 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 SACSQ9NZJ4 4579 aa11.76□□□□□ -0.53
DNMT3A-215ENST00000496570 TRAV8-2A0A0B4J237 113 aa11.75□□□□□ -0.53
DNMT3A-215ENST00000496570 MRPS12O15235 138 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-215ENST00000496570 PTTG1O95997 202 aa11.75□□□□□ -0.53
DNMT3A-215ENST00000496570 OR5G3P0C626 314 aa11.75□□□□□ -0.53
DNMT3A-215ENST00000496570 SPP1P10451 314 aa11.75□□□□□ -0.53
DNMT3A-215ENST00000496570 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
DNMT3A-215ENST00000496570 S100A11P31949 105 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms