RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZNF488Q96MN9 340 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 BSNQ9UPA5 3926 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 TLN1Q9Y490 2541 aaKnown RBP7.34□□□□□ -1.23
HPS4-217ENST00000496385 TRBV7-9A0A0J9YWB2 115 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 ZNF716A6NP11 495 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 OR1C1Q15619 314 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
HPS4-217ENST00000496385 MCRIP2Q9BUT9 160 aaKnown RBP7.34□□□□□ -1.23
HPS4-217ENST00000496385 MLST8Q9BVC4 326 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 ENY2Q9NPA8 101 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 SELENOKQ9Y6D0 94 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 IGHV1-45A0A0A0MS14 117 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 A0A0J9YW62 118 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 IGLL5B9A064 214 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 C12orf77C9JDV5 145 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 K7EM74 188 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 APOHP02749 345 aaPredicted RBP7.34□□□□□ -1.23
HPS4-217ENST00000496385 SRYQ05066 204 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 PCOLCEQ15113 449 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 ZNF329Q86UD4 541 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 COQ2Q96H96 371 aa7.34□□□□□ -1.23
HPS4-217ENST00000496385 CHCHD2Q9Y6H1 151 aaPredicted RBP7.34□□□□□ -1.23
HPS4-217ENST00000496385 KMT2BQ9UMN6 2715 aaPredicted RBP7.34□□□□□ -1.23
HPS4-217ENST00000496385 P01737 135 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 HSPE1P61604 102 aaKnown RBP7.33□□□□□ -1.24
HPS4-217ENST00000496385 UBE2L3P68036 154 aaKnown RBP7.33□□□□□ -1.24
HPS4-217ENST00000496385 FOXI1Q12951 378 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 LY6DQ14210 128 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 CR1LQ2VPA4 569 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 TMEM177Q53S58 311 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 RNF183Q96D59 192 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 ZNF71Q9NQZ8 489 aaPredicted RBP7.33□□□□□ -1.24
HPS4-217ENST00000496385 PRO0461Q9UI25 63 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 SPTA1P02549 2419 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 TCRBV4S1A1TA0A5B7 111 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 C5orf49A4QMS7 147 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 NCR2O95944 276 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 GCSHP23434 173 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 ABHD17BQ5VST6 288 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 LINC00696Q6ZRV3 163 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 FDCSPQ8NFU4 85 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 PRSS3P2Q8NHM4 247 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 TMEM190Q8WZ59 177 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 FOXA2Q9Y261 457 aaPredicted RBP7.33□□□□□ -1.24
HPS4-217ENST00000496385 EML6Q6ZMW3 1958 aa7.33□□□□□ -1.24
HPS4-217ENST00000496385 C15orf61A6NNL5 157 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 NPIPB6E9PJ23 425 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 TNFRSF13BO14836 293 aaPredicted RBP7.32□□□□□ -1.24
HPS4-217ENST00000496385 UCNP55089 124 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 FOXF2Q12947 444 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 SLC25A48Q6ZT89 311 aaKnown RBP7.32□□□□□ -1.24
HPS4-217ENST00000496385 OR5AN1Q8NGI8 311 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 DAZAP1Q96EP5 407 aaKnown RBP7.32□□□□□ -1.24
HPS4-217ENST00000496385 ZNF714Q96N38 554 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 ANAPC13Q9BS18 74 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 RTL8AQ9BWD3 113 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 SRXN1Q9BYN0 137 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 USF3Q68DE3 2245 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 FBLL1A6NHQ2 334 aaKnown RBP7.32□□□□□ -1.24
HPS4-217ENST00000496385 H3BMG7 143 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 CCL2P13500 99 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 MYCNOSP40205 109 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 FXYD2P54710 66 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 ATP5G2Q06055 141 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 ACP7Q6ZNF0 438 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 SH2D6Q7Z4S9 175 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 CEND1Q8N111 149 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 PIP4P2Q8N4L2 257 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 OR1L4Q8NGR5 311 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 UBALD1Q8TB05 177 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 ARPC1AQ92747 370 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 PGLYRP4Q96LB8 373 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 LINC00479Q96M42 142 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 C1QTNF4Q9BXJ3 329 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 PRORYQ9H606 182 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 ZNF407Q9C0G0 2248 aa7.32□□□□□ -1.24
HPS4-217ENST00000496385 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 FCGR3BO75015 233 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 APOMO95445 188 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 RIGQ13278 110 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 Q6ZUT4 128 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 FMC1Q96HJ9 113 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 ZNF414Q96IQ9 312 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 IMMP1LQ96LU5 166 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 DEFB126Q9BYW3 111 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 EPDR1Q9UM22 224 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 SYT8Q8NBV8 401 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 CHAC1Q9BUX1 264 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 TMEM14BQ9NUH8 114 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 TMEM140Q9NV12 185 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 CFAP46Q8IYW2 2715 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms