RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
GAPDH-210ENST00000496049 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 A0A1W2PPV4 95 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 WI2-2373I1.2A0A1W2PRP0 233 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
GAPDH-210ENST00000496049 BMI1P35226 326 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 PLP1P60201 277 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 RHOBP62745 196 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 DEFB136Q30KP8 78 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 C18orf65Q6ZTR6 163 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 ZNF767PQ75MW2 155 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 C1QL4Q86Z23 238 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 OR10G4Q8NGN3 311 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 OR10G9Q8NGN4 311 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 OR10G7Q8NGN6 311 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 LRRC20Q8TCA0 184 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 TMEM190Q8WZ59 177 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 METTL26Q96S19 204 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
GAPDH-210ENST00000496049 CCL24O00175 119 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 RAB2AP61019 212 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 ZNF680Q8NEM1 530 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 CITED1Q99966 193 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
GAPDH-210ENST00000496049 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
GAPDH-210ENST00000496049 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
GAPDH-210ENST00000496049 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
GAPDH-210ENST00000496049 SULT1A2P50226 295 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 TAS2R45P59539 299 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 KRTAP10-3P60369 221 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 FAM74A1Q5RGS3 127 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 FAM122CQ6P4D5 195 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 OR4F17Q8NGA8 305 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 OR4F4Q96R69 305 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 DAZ1Q9NQZ3 744 aaKnown RBP11.49□□□□□ -0.57
GAPDH-210ENST00000496049 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 RFNGQ9Y644 331 aa11.49□□□□□ -0.57
GAPDH-210ENST00000496049 ZNF705EA8MWA4 302 aaPredicted RBP11.48□□□□□ -0.57
GAPDH-210ENST00000496049 TEX46H3BTG2 121 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 LGALS9O00182 355 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 PF4P02776 101 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 NPPCP23582 126 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 MYCNOSP40205 109 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 SYNJ2BPP57105 145 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 RAB14P61106 215 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 FHL3Q13643 280 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 USF2Q15853 346 aaPredicted RBP11.48□□□□□ -0.57
GAPDH-210ENST00000496049 FAM78BQ5VT40 261 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 RCC1LQ96I51 464 aaKnown RBP11.48□□□□□ -0.57
GAPDH-210ENST00000496049 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 RPRMQ9NS64 109 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
GAPDH-210ENST00000496049 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 CTXND1A0A1B0GTU2 59 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 ADARB2-AS1A8MUL3 147 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 A8MWP6 167 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 M0QZ24 198 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 SLURP1P55000 103 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 UNQ9165/PRO28630Q6UXU0 137 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 SLC25A22Q9H936 323 aa11.47□□□□□ -0.57
GAPDH-210ENST00000496049 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
GAPDH-210ENST00000496049 IGHV3OR16-8A0A075B7F1 116 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 A0A1W2PS18 150 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 SEC14L6B5MCN3 397 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 K7EMT4 169 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 BLOC1S1P78537 153 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 KLF5Q13887 457 aaPredicted RBP11.46□□□□□ -0.57
GAPDH-210ENST00000496049 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 MARC2Q969Z3 335 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 SAT2Q96F10 170 aaPredicted RBP11.46□□□□□ -0.57
GAPDH-210ENST00000496049 UHRF2Q96PU4 802 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 SHANK2-AS3Q9BTD1 123 aa11.46□□□□□ -0.57
GAPDH-210ENST00000496049 SLC25A39Q9BZJ4 359 aaPredicted RBP11.46□□□□□ -0.57
GAPDH-210ENST00000496049 TECRQ9NZ01 308 aaKnown RBP11.46□□□□□ -0.57
GAPDH-210ENST00000496049 H3BRN7 92 aa11.45□□□□□ -0.58
GAPDH-210ENST00000496049 HBE1P02100 147 aa11.45□□□□□ -0.58
GAPDH-210ENST00000496049 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
GAPDH-210ENST00000496049 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
GAPDH-210ENST00000496049 RAB24Q969Q5 203 aa11.45□□□□□ -0.58
GAPDH-210ENST00000496049 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
GAPDH-210ENST00000496049 ZNF207O43670 478 aaKnown RBP11.44□□□□□ -0.58
GAPDH-210ENST00000496049 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
GAPDH-210ENST00000496049 C8orf88P0DMB2 117 aa11.44□□□□□ -0.58
GAPDH-210ENST00000496049 CRYBB3P26998 211 aa11.44□□□□□ -0.58
GAPDH-210ENST00000496049 IFITM2Q01629 132 aa11.44□□□□□ -0.58
GAPDH-210ENST00000496049 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms